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  5. Ore_g19696

Ore_g19696 (MDF, DOT2)


Aliases : MDF, DOT2

Description : not classified & original description: none


Gene families : OG0004143 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004143_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g19696

Target Alias Description ECC score Gene Family Method Actions
AT5G16780 MDF, DOT2 SART-1 family 0.07 OrthoFinder output from all 47 species
Adi_g055487 MDF, DOT2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g17034 MDF, DOT2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g49913 MDF, DOT2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.14G049800.1 MDF, DOT2,... not classified & original description: pacid=50634914... 0.04 OrthoFinder output from all 47 species
Dcu_g07125 MDF, DOT2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01035173001 MDF, DOT2 SART-1 family protein DOT2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_00217 MDF, DOT2 SART-1 family protein DOT2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os02g30730.2 MDF, DOT2, LOC_Os02g30730 SART-1 family protein DOT2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Lfl_g10540 MDF, DOT2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g15709 MDF, DOT2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g20510 MDF, DOT2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g14031 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Smo404232 MDF, DOT2 SART-1 family protein DOT2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc11g008460.1.1 MDF, DOT2, Solyc11g008460 SART-1 family protein DOT2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc11g008470.2.1 MDF, DOT2, Solyc11g008470 SART-1 family protein DOT2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e018582_P001 MDF, DOT2, Zm00001e018582 SART-1 family protein DOT2 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000398 mRNA splicing, via spliceosome IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005049 nuclear export signal receptor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140142 nucleocytoplasmic carrier activity IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR005011 SNU66/SART1 752 798
IPR005011 SNU66/SART1 259 733
No external refs found!