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  5. Ore_g18818

Ore_g18818


Description : component *(IDM1) of ROS1-recruitment complex & original description: none


Gene families : OG0000402 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000402_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g18818

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00050160 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.PHD finger... 0.02 OrthoFinder output from all 47 species
AMTR_s00039p00203500 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.PHD finger... 0.02 OrthoFinder output from all 47 species
AMTR_s00146p00080830 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.PHD finger... 0.02 OrthoFinder output from all 47 species
AT4G14920 No alias Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc... 0.03 OrthoFinder output from all 47 species
Adi_g001198 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g020053 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g057776 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g08216 No alias component *(IDM1) of ROS1-recruitment complex & original... 0.03 OrthoFinder output from all 47 species
Aev_g13062 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g17243 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g20182 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g20272 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g23026 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g32072 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g10962 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g13559 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene15069.t1 Aspi01Gene15069 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene19628.t1 Aspi01Gene19628 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene25981.t1 Aspi01Gene25981 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene53152.t1 Aspi01Gene53152 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene53154.t1 Aspi01Gene53154 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g16245 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g31776 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.04G075300.1 Ceric.04G075300 not classified & original description: pacid=50631416... 0.04 OrthoFinder output from all 47 species
Ceric.35G031200.1 Ceric.35G031200 not classified & original description: pacid=50581090... 0.02 OrthoFinder output from all 47 species
Cre08.g386000 No alias No description available 0.03 OrthoFinder output from all 47 species
Dac_g23646 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g09002 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g10239 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g16965 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ehy_g07958 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g08961 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g09265 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g10038 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01014219001 No alias RNA biosynthesis.transcriptional activation.PHD finger... 0.06 OrthoFinder output from all 47 species
GSVIVT01017972001 No alias RNA biosynthesis.transcriptional activation.PHD finger... 0.06 OrthoFinder output from all 47 species
Gb_06644 No alias component IDM1 of ROS1-recruitment complex. PHD finger... 0.03 OrthoFinder output from all 47 species
Gb_10088 No alias component IDM1 of ROS1-recruitment complex. PHD finger... 0.02 OrthoFinder output from all 47 species
LOC_Os03g53630.1 LOC_Os03g53630 PHD finger transcription factor 0.04 OrthoFinder output from all 47 species
LOC_Os04g59510.1 LOC_Os04g59510 PHD finger transcription factor 0.04 OrthoFinder output from all 47 species
LOC_Os07g07690.1 LOC_Os07g07690 PHD finger transcription factor 0.04 OrthoFinder output from all 47 species
Len_g17560 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g47387 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g02467 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06765 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
MA_139275g0010 No alias PHD finger transcription factor 0.06 OrthoFinder output from all 47 species
MA_14500g0010 No alias component IDM1 of ROS1-recruitment complex. PHD finger... 0.06 OrthoFinder output from all 47 species
Mp6g21090.2 No alias PHD finger transcription factor 0.07 OrthoFinder output from all 47 species
Msp_g13348 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g13767 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g01695 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g06867 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g16242 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g18645 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g35938 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g01427 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g41948 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0009.g004313 No alias not classified & original description: CDS=588-5219 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0245.g026694 No alias not classified & original description: CDS=519-4760 0.04 OrthoFinder output from all 47 species
Sam_g15944 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g16192 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo80470 No alias RNA biosynthesis.transcriptional activation.PHD finger... 0.02 OrthoFinder output from all 47 species
Solyc06g082040.2.1 Solyc06g082040 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Solyc09g065340.3.1 Solyc09g065340 PHD finger transcription factor 0.03 OrthoFinder output from all 47 species
Solyc09g076010.3.1 Solyc09g076010 PHD finger transcription factor 0.06 OrthoFinder output from all 47 species
Spa_g04858 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g21891 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g50990 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Tin_g20194 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g21039 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e005667_P001 Zm00001e005667 PHD finger transcription factor 0.04 OrthoFinder output from all 47 species
Zm00001e012046_P003 Zm00001e012046 PHD finger transcription factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007062 sister chromatid cohesion IEP HCCA
BP GO:0007064 mitotic sister chromatid cohesion IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR032308 TDBD 1206 1257
No external refs found!