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  5. Ore_g17506

Ore_g17506 (GFA2)


Aliases : GFA2

Description : co-chaperone *(Hsp40) & original description: none


Gene families : OG0001086 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001086_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g17506
Cluster HCCA: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
Adi_g047802 GFA2 co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g13445 GFA2 co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g07612 GFA2 co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g11087 GFA2 co-chaperone *(Hsp40) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g17622 GFA2 co-chaperone *(Hsp40) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g01756 GFA2 co-chaperone *(Hsp40) & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g03107 GFA2 co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g14968 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g20511 GFA2 co-chaperone *(Hsp40) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g14968 GFA2 co-chaperone *(Hsp40) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g08090 GFA2 co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g08259 GFA2 co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g11911 No alias co-chaperone *(Hsp40) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g11912 No alias co-chaperone (GFA2) involved in gametogenesis & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0031072 heat shock protein binding IEA Interproscan
MF GO:0051082 unfolded protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005681 spliceosomal complex IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032182 ubiquitin-like protein binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043130 ubiquitin binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR001305 HSP_DnaJ_Cys-rich_dom 232 292
IPR001623 DnaJ_domain 90 152
IPR002939 DnaJ_C 205 417
No external refs found!