Aliases : UPL7
Description : E3 ubiquitin ligase *(UPL6) & original description: none
Gene families : OG0001555 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001555_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Ala_g14951 | UPL6 | E3 ubiquitin ligase *(UPL6) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene15620.t1 | UPL6, Aspi01Gene15620 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene18041.t1 | UPL6, Aspi01Gene18041 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ceric.05G020700.1 | UPL6, Ceric.05G020700 | E3 ubiquitin ligase *(UPL6) & original description:... | 0.02 | OrthoFinder output from all 47 species | |
Ceric.1Z062300.1 | UPL7, Ceric.1Z062300 | E3 ubiquitin ligase *(UPL6) & original description:... | 0.05 | OrthoFinder output from all 47 species | |
Lfl_g08600 | UPL6 | E3 ubiquitin ligase *(UPL6) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
MA_10436808g0010 | UPL6 | E3 ubiquitin-protein ligase UPL6 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
Mp3g18370.1 | UPL6 | monomeric E3 ubiquitin ligase (HECT) | 0.02 | OrthoFinder output from all 47 species | |
Mp7g02100.1 | UPL7 | monomeric E3 ubiquitin ligase (HECT) | 0.02 | OrthoFinder output from all 47 species | |
Solyc01g057900.3.1 | UPL6, Solyc01g057900 | monomeric E3 ubiquitin ligase (HECT) | 0.02 | OrthoFinder output from all 47 species | |
Tin_g45924 | UPL7 | E3 ubiquiTin ligase *(UPL6) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e031128_P003 | UPL6, Zm00001e031128 | monomeric E3 ubiquitin ligase (HECT) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e039899_P001 | UPL6, Zm00001e039899 | monomeric E3 ubiquitin ligase (HECT) | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004842 | ubiquitin-protein transferase activity | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000049 | tRNA binding | IEP | HCCA |
MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
BP | GO:0006082 | organic acid metabolic process | IEP | HCCA |
BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
BP | GO:0006520 | amino acid metabolic process | IEP | HCCA |
MF | GO:0016874 | ligase activity | IEP | HCCA |
MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
BP | GO:0019752 | carboxylic acid metabolic process | IEP | HCCA |
BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
BP | GO:0043038 | amino acid activation | IEP | HCCA |
BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
BP | GO:0043436 | oxoacid metabolic process | IEP | HCCA |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000569 | HECT_dom | 876 | 1189 |
No external refs found! |