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  5. Ore_g16006

Ore_g16006 (SKIP)


Aliases : SKIP

Description : component *(SKIP/MAC6) of MAC spliceosome-associated complex & original description: none


Gene families : OG0003767 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003767_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g16006

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00056p00045910 SKIP,... RNA processing.RNA splicing.spliceosome-associated... 0.02 OrthoFinder output from all 47 species
Aev_g08818 SKIP component *(SKIP/MAC6) of MAC spliceosome-associated... 0.03 OrthoFinder output from all 47 species
Aob_g03422 SKIP component *(SKIP/MAC6) of MAC spliceosome-associated... 0.04 OrthoFinder output from all 47 species
Cba_g61494 SKIP component *(SKIP/MAC6) of MAC spliceosome-associated... 0.02 OrthoFinder output from all 47 species
Ceric.15G032900.1 SKIP, Ceric.15G032900 component *(SKIP/MAC6) of MAC spliceosome-associated... 0.02 OrthoFinder output from all 47 species
Cre01.g051100 SKIP RNA processing.RNA splicing.spliceosome-associated... 0.01 OrthoFinder output from all 47 species
LOC_Os02g52250.1 SKIP, LOC_Os02g52250 component SKIP/MAC6 of non-snRNP MOS4-associated complex 0.02 OrthoFinder output from all 47 species
MA_70500g0010 SKIP component SKIP/MAC6 of non-snRNP MOS4-associated complex 0.04 OrthoFinder output from all 47 species
Nbi_g07685 SKIP component *(SKIP/MAC6) of MAC spliceosome-associated... 0.02 OrthoFinder output from all 47 species
Pir_g10847 SKIP component *(SKIP/MAC6) of MAC spliceosome-associated... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000398 mRNA splicing, via spliceosome IEA Interproscan
CC GO:0005681 spliceosomal complex IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
InterPro domains Description Start Stop
IPR004015 SKI-int_prot_SKIP_SNW-dom 181 339
No external refs found!