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  5. Ore_g15379

Ore_g15379 (PEPC1, ATPEPC1, ATPPC1, PPC1)


Aliases : PEPC1, ATPEPC1, ATPPC1, PPC1

Description : EC_4.1 carbon-carbon lyase & original description: none


Gene families : OG0000643 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000643_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g15379

Target Alias Description ECC score Gene Family Method Actions
Ala_g05426 ATPPC3, PPC3 EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene47988.t1 ATPPC4, PPC4,... PEP carboxylase *(PPC) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g14717 PEPC1, ATPEPC1,... EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g32641 PEPC1, ATPEPC1,... EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g05790 PPC2, ATPPC2 EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g04041 ATPPC4, PPC4 PEP carboxylase *(PPC) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01011979001 ATPPC4, PPC4 Photosynthesis.CAM/C4 photosynthesis.phosphoenolpyruvate... 0.02 OrthoFinder output from all 47 species
GSVIVT01020705001 ATPPC3, PPC3 Photosynthesis.CAM/C4 photosynthesis.phosphoenolpyruvate... 0.02 OrthoFinder output from all 47 species
Lfl_g06687 PEPC1, ATPEPC1,... EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Mp1g11340.1 PPC2, ATPPC2 PEP carboxylase 0.03 OrthoFinder output from all 47 species
Pir_g10442 PEPC1, ATPEPC1,... EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e033797_P001 PEPC1, ATPEPC1,... PEP carboxylase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006099 tricarboxylic acid cycle IEA Interproscan
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEA Interproscan
BP GO:0015977 carbon fixation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016042 lipid catabolic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
InterPro domains Description Start Stop
IPR021135 PEP_COase 5 548
No external refs found!