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  5. Ore_g10754

Ore_g10754


Description : small subunit sigma of AP-4 vacuole cargo adaptor complex & original description: none


Gene families : OG0006894 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006894_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g10754

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0155.g053611 No alias small subunit sigma of AP-4 vacuole cargo adaptor... 0.03 OrthoFinder output from all 47 species
Cre07.g330950 No alias Vesicle trafficking.endomembrane trafficking.vacuolar... 0.02 OrthoFinder output from all 47 species
GSVIVT01015270001 No alias Vesicle trafficking.endomembrane trafficking.vacuolar... 0.03 OrthoFinder output from all 47 species
LOC_Os08g30480.1 LOC_Os08g30480 small subunit sigma of AP-4 vacuole cargo adaptor complex 0.02 OrthoFinder output from all 47 species
LOC_Os10g22330.1 LOC_Os10g22330 small subunit sigma of AP-4 vacuole cargo adaptor complex 0.02 OrthoFinder output from all 47 species
Lfl_g19338 No alias small subunit sigma of AP-4 vacuole cargo adaptor... 0.02 OrthoFinder output from all 47 species
MA_23830g0010 No alias AP-4 complex subunit sigma OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp6g09610.1 No alias small subunit sigma of AP-4 vacuole cargo adaptor complex 0.03 OrthoFinder output from all 47 species
Zm00001e022339_P001 Zm00001e022339 small subunit sigma of AP-4 vacuole cargo adaptor complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000966 RNA 5'-end processing IEP HCCA
BP GO:0001682 tRNA 5'-leader removal IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0030677 ribonuclease P complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043248 proteasome assembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0099116 tRNA 5'-end processing IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1902555 endoribonuclease complex IEP HCCA
CC GO:1905348 endonuclease complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR022775 AP_mu_sigma_su 2 141
No external refs found!