Description : component *(uL18c) of large plastid ribosomal-subunit proteome & original description: none
Gene families : OG0005910 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005910_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00013p00209880 | evm_27.TU.AmTr_v1... | Protein biosynthesis.organelle translation... | 0.03 | OrthoFinder output from all 47 species | |
AT1G48350 | No alias | Ribosomal L18p/L5e family protein | 0.07 | OrthoFinder output from all 47 species | |
Adi_g001890 | No alias | component *(uL18c) of large plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
Aev_g28610 | No alias | component *(uL18c) of large plastid ribosomal-subunit... | 0.05 | OrthoFinder output from all 47 species | |
Ala_g00228 | No alias | component *(uL18c) of large plastid ribosomal-subunit... | 0.06 | OrthoFinder output from all 47 species | |
Als_g00187 | No alias | component *(uL18c) of large plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
Aob_g03843 | No alias | component *(uL18c) of large plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
Aop_g20657 | No alias | component *(uL18c) of large plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
Cba_g10879 | No alias | component *(uL18c) of large plastid ribosomal-subunit... | 0.05 | OrthoFinder output from all 47 species | |
Ceric.13G022200.1 | Ceric.13G022200 | component *(uL18c) of large plastid ribosomal-subunit... | 0.08 | OrthoFinder output from all 47 species | |
Cre01.g052100 | No alias | Protein biosynthesis.organelle translation... | 0.04 | OrthoFinder output from all 47 species | |
Dcu_g31625 | No alias | component *(uL18c) of large plastid ribosomal-subunit... | 0.05 | OrthoFinder output from all 47 species | |
Dde_g24129 | No alias | component *(uL18c) of large plastid ribosomal-subunit... | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g02012 | No alias | component *(uL18c) of large plastid ribosomal-subunit... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01017720001 | No alias | Protein biosynthesis.organelle translation... | 0.03 | OrthoFinder output from all 47 species | |
Gb_12756 | No alias | component psRPL18 of large ribosomal subunit proteome | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os03g61260.1 | LOC_Os03g61260 | component psRPL18 of large ribosomal subunit proteome | 0.07 | OrthoFinder output from all 47 species | |
Len_g30980 | No alias | component *(uL18c) of large plastid ribosomal-subunit... | 0.06 | OrthoFinder output from all 47 species | |
MA_7609850g0010 | No alias | 50S ribosomal protein L18, chloroplastic OS=Arabidopsis... | 0.06 | OrthoFinder output from all 47 species | |
Mp6g08500.1 | No alias | component psRPL18 of large ribosomal subunit proteome | 0.08 | OrthoFinder output from all 47 species | |
Msp_g22178 | No alias | component *(uL18c) of large plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g15098 | No alias | component *(uL18c) of large plastid ribosomal-subunit... | 0.06 | OrthoFinder output from all 47 species | |
Pir_g00223 | No alias | component *(uL18c) of large plastid ribosomal-subunit... | 0.05 | OrthoFinder output from all 47 species | |
Ppi_g02809 | No alias | component *(uL18c) of large plastid ribosomal-subunit... | 0.06 | OrthoFinder output from all 47 species | |
Sam_g19670 | No alias | component *(uL18c) of large plastid ribosomal-subunit... | 0.06 | OrthoFinder output from all 47 species | |
Sam_g45370 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Solyc12g098890.2.1 | Solyc12g098890 | component psRPL18 of large ribosomal subunit proteome | 0.07 | OrthoFinder output from all 47 species | |
Spa_g00581 | No alias | component *(uL18c) of large plastid ribosomal-subunit... | 0.05 | OrthoFinder output from all 47 species | |
Tin_g00498 | No alias | component *(uL18c) of large plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e006246_P001 | Zm00001e006246 | component psRPL18 of large ribosomal subunit proteome | 0.07 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003725 | double-stranded RNA binding | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
MF | GO:0005509 | calcium ion binding | IEP | HCCA |
BP | GO:0006164 | purine nucleotide biosynthetic process | IEP | HCCA |
BP | GO:0006754 | ATP biosynthetic process | IEP | HCCA |
BP | GO:0006801 | superoxide metabolic process | IEP | HCCA |
BP | GO:0009141 | nucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0009142 | nucleoside triphosphate biosynthetic process | IEP | HCCA |
BP | GO:0009144 | purine nucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0009145 | purine nucleoside triphosphate biosynthetic process | IEP | HCCA |
BP | GO:0009150 | purine ribonucleotide metabolic process | IEP | HCCA |
BP | GO:0009152 | purine ribonucleotide biosynthetic process | IEP | HCCA |
BP | GO:0009165 | nucleotide biosynthetic process | IEP | HCCA |
BP | GO:0009199 | ribonucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0009201 | ribonucleoside triphosphate biosynthetic process | IEP | HCCA |
BP | GO:0009205 | purine ribonucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0009206 | purine ribonucleoside triphosphate biosynthetic process | IEP | HCCA |
BP | GO:0009259 | ribonucleotide metabolic process | IEP | HCCA |
BP | GO:0009260 | ribonucleotide biosynthetic process | IEP | HCCA |
CC | GO:0009521 | photosystem | IEP | HCCA |
CC | GO:0009523 | photosystem II | IEP | HCCA |
CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | HCCA |
MF | GO:0015078 | proton transmembrane transporter activity | IEP | HCCA |
BP | GO:0015979 | photosynthesis | IEP | HCCA |
BP | GO:0015986 | proton motive force-driven ATP synthesis | IEP | HCCA |
BP | GO:0019693 | ribose phosphate metabolic process | IEP | HCCA |
CC | GO:0019898 | extrinsic component of membrane | IEP | HCCA |
CC | GO:0032991 | protein-containing complex | IEP | HCCA |
CC | GO:0033177 | proton-transporting two-sector ATPase complex, proton-transporting domain | IEP | HCCA |
MF | GO:0043167 | ion binding | IEP | HCCA |
MF | GO:0043169 | cation binding | IEP | HCCA |
CC | GO:0045263 | proton-transporting ATP synthase complex, coupling factor F(o) | IEP | HCCA |
BP | GO:0046034 | ATP metabolic process | IEP | HCCA |
BP | GO:0046390 | ribose phosphate biosynthetic process | IEP | HCCA |
MF | GO:0046872 | metal ion binding | IEP | HCCA |
MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | HCCA |
MF | GO:0071949 | FAD binding | IEP | HCCA |
BP | GO:0072522 | purine-containing compound biosynthetic process | IEP | HCCA |
BP | GO:0072593 | reactive oxygen species metabolic process | IEP | HCCA |
CC | GO:0098796 | membrane protein complex | IEP | HCCA |
BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | HCCA |
BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | HCCA |
CC | GO:1902494 | catalytic complex | IEP | HCCA |
CC | GO:1990204 | oxidoreductase complex | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR005484 | Ribosomal_L18 | 47 | 164 |
No external refs found! |