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  5. Aev_g15019

Aev_g15019


Description : not classified & original description: none


Gene families : OG0001797 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001797_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aev_g15019
Cluster HCCA: Cluster_96

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00088750 evm_27.TU.AmTr_v1... Protein TSS OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT1G01320 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT1G15290 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G28080 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g101355 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g14883 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Als_g21641 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Als_g26135 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g29315 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aob_g08477 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g18068 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g26369 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene56297.t1 Aspi01Gene56297 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene61689.t1 Aspi01Gene61689 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0031.g024493 No alias not classified & original description: CDS=852-6302 0.02 OrthoFinder output from all 47 species
Cba_g16051 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.12G017100.1 Ceric.12G017100 not classified & original description: pacid=50600997... 0.03 OrthoFinder output from all 47 species
Dac_g23136 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g31539 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g12674 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g04071 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g19382 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01023693001 No alias Protein TSS OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01023694001 No alias Protein TSS OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
LOC_Os04g55230.1 LOC_Os04g55230 Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.03 OrthoFinder output from all 47 species
LOC_Os07g23990.1 LOC_Os07g23990 Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.05 OrthoFinder output from all 47 species
Lfl_g03522 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_10433171g0010 No alias Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.02 OrthoFinder output from all 47 species
MA_10436966g0010 No alias Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath : 111.0) 0.05 OrthoFinder output from all 47 species
Msp_g31543 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g42756 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g07995 No alias substrate adaptor of SCF E3 ubiquitin ligase *(PCH) &... 0.02 OrthoFinder output from all 47 species
Nbi_g27550 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g25092 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g14901 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g15877 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pir_g56916 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g09729 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g19748 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g19896 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g33780 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g16287 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0061.g015275 No alias not classified & original description: CDS=1-5475 0.02 OrthoFinder output from all 47 species
Sam_g08962 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g11582 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Smo10032 No alias Protein TSS OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
Solyc06g068230.4.1 Solyc06g068230 Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.03 OrthoFinder output from all 47 species
Solyc07g006030.4.1 Solyc07g006030 Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.06 OrthoFinder output from all 47 species
Spa_g02169 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g22658 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g47021 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g50937 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g55654 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g56345 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g08453 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR033646 CLU-central 787 930
IPR028275 CLU_N 48 118
No external refs found!