Description : component *(eS1) of small ribosomal-subunit (SSU) proteome & original description: none
Gene families : OG0001731 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001731_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00002p00271660 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.02 | OrthoFinder output from all 47 species | |
AT3G04840 | No alias | Ribosomal protein S3Ae | 0.02 | OrthoFinder output from all 47 species | |
AT4G34670 | No alias | Ribosomal protein S3Ae | 0.02 | OrthoFinder output from all 47 species | |
Adi_g024739 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g060843 | No alias | component *(eS1) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00020710.39 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.01 | OrthoFinder output from all 47 species | |
Cre13.g568650 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.01 | OrthoFinder output from all 47 species | |
Dac_g13329 | No alias | component *(eS1) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
Gb_02289 | No alias | component RPS3a of SSU proteome | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os03g10340.1 | LOC_Os03g10340 | component RPS3a of SSU proteome | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g26102 | No alias | component *(eS1) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
MA_124901g0010 | No alias | component RPS3a of SSU proteome | 0.02 | OrthoFinder output from all 47 species | |
Mp6g02810.1 | No alias | component RPS3a of SSU proteome | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g25805 | No alias | component *(eS1) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
Sam_g07668 | No alias | component *(eS1) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
Solyc06g072490.3.1 | Solyc06g072490 | component RPS3a of SSU proteome | 0.02 | OrthoFinder output from all 47 species | |
Spa_g05776 | No alias | component *(eS1) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
Tin_g01747 | No alias | component *(eS1) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e038777_P001 | Zm00001e038777 | component RPS3a of SSU proteome | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000287 | magnesium ion binding | IEP | HCCA |
CC | GO:0005634 | nucleus | IEP | HCCA |
BP | GO:0006325 | chromatin organization | IEP | HCCA |
BP | GO:0006334 | nucleosome assembly | IEP | HCCA |
BP | GO:0006338 | chromatin remodeling | IEP | HCCA |
BP | GO:0006396 | RNA processing | IEP | HCCA |
BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
BP | GO:0006400 | tRNA modification | IEP | HCCA |
BP | GO:0008033 | tRNA processing | IEP | HCCA |
MF | GO:0008192 | RNA guanylyltransferase activity | IEP | HCCA |
MF | GO:0008193 | tRNA guanylyltransferase activity | IEP | HCCA |
BP | GO:0009451 | RNA modification | IEP | HCCA |
BP | GO:0016043 | cellular component organization | IEP | HCCA |
MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
BP | GO:0022607 | cellular component assembly | IEP | HCCA |
BP | GO:0034470 | ncRNA processing | IEP | HCCA |
BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
BP | GO:0034728 | nucleosome organization | IEP | HCCA |
CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
BP | GO:0043933 | protein-containing complex organization | IEP | HCCA |
BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
BP | GO:0065004 | protein-DNA complex assembly | IEP | HCCA |
MF | GO:0070568 | guanylyltransferase activity | IEP | HCCA |
BP | GO:0071824 | protein-DNA complex subunit organization | IEP | HCCA |
BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001593 | Ribosomal_S3Ae | 16 | 221 |
No external refs found! |