Aliases : ATARFA1F, ARFA1F
Description : ARF-GTPase *(ARF1) & original description: none
Gene families : OG0000301 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000301_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Ppi_g62833 | |
Cluster | HCCA: Cluster_298 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Adi_g009714 | ATARFA1F, ARFA1F | ARF-GTPase *(ARF1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aob_g19871 | ATARFB1B, ARFB1B | ARF-GTPase *(ARFA) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Cba_g71009 | ATARFB1B, ARFB1B | ARF-GTPase *(ARFA) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ceric.24G027900.1 | ATARFA1B,... | not classified & original description: pacid=50629605... | 0.03 | OrthoFinder output from all 47 species | |
Dac_g04124 | ATARFB1B, ARFB1B | ARF-GTPase *(ARFA) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dac_g05484 | ATARFA1F, ARFA1F | ARF-GTPase *(ARF1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dde_g02001 | ATARFA1F, ARFA1F | ARF-GTPase *(ARF1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g01882 | ATARFB1B, ARFB1B | ARF-GTPase *(ARFA) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pir_g02984 | ATARFA1F, ARFA1F | ARF-GTPase *(ARF1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Spa_g29324 | ATARFA1B, ARFA1B | ARF-GTPase *(ARF1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Spa_g49717 | ATARFA1B, ARFA1B | ARF-GTPase *(ARF1) & original description: none | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003924 | GTPase activity | IEA | Interproscan |
MF | GO:0005525 | GTP binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000041 | transition metal ion transport | IEP | HCCA |
MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0005381 | iron ion transmembrane transporter activity | IEP | HCCA |
BP | GO:0006352 | DNA-templated transcription initiation | IEP | HCCA |
BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
BP | GO:0006826 | iron ion transport | IEP | HCCA |
BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
BP | GO:0030001 | metal ion transport | IEP | HCCA |
BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
CC | GO:0032039 | integrator complex | IEP | HCCA |
BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
CC | GO:0032991 | protein-containing complex | IEP | HCCA |
CC | GO:0033573 | high-affinity iron permease complex | IEP | HCCA |
BP | GO:0034220 | monoatomic ion transmembrane transport | IEP | HCCA |
BP | GO:0034755 | iron ion transmembrane transport | IEP | HCCA |
MF | GO:0046873 | metal ion transmembrane transporter activity | IEP | HCCA |
MF | GO:0046915 | transition metal ion transmembrane transporter activity | IEP | HCCA |
BP | GO:0050789 | regulation of biological process | IEP | HCCA |
BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
BP | GO:0065007 | biological regulation | IEP | HCCA |
BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
BP | GO:0098655 | monoatomic cation transmembrane transport | IEP | HCCA |
BP | GO:0098662 | inorganic cation transmembrane transport | IEP | HCCA |
CC | GO:0098797 | plasma membrane protein complex | IEP | HCCA |
MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
CC | GO:1902495 | transmembrane transporter complex | IEP | HCCA |
BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
CC | GO:1905862 | ferroxidase complex | IEP | HCCA |
CC | GO:1990204 | oxidoreductase complex | IEP | HCCA |
CC | GO:1990351 | transporter complex | IEP | HCCA |
BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR006689 | Small_GTPase_ARF/SAR | 5 | 176 |
No external refs found! |