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  5. Ppi_g54640

Ppi_g54640 (MSP3, ATWRKY34, WRKY34)


Aliases : MSP3, ATWRKY34, WRKY34

Description : WRKY-type transcription factor & original description: none


Gene families : OG0000020 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g54640
Cluster HCCA: Cluster_259

Target Alias Description ECC score Gene Family Method Actions
AT1G29860 ATWRKY71, WRKY71 WRKY DNA-binding protein 71 0.04 OrthoFinder output from all 47 species
AT4G01720 AtWRKY47, WRKY47 WRKY family transcription factor 0.03 OrthoFinder output from all 47 species
Als_g07786 ATWRKY58, WRKY58 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.24G019100.1 Ceric.24G019100 WRKY-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Dde_g46794 WRKY42, AtWRKY42 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g25812 ATWRKY50, WRKY50 WRKY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Solyc03g095770.3.1 ATWRKY70,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
Solyc06g070990.3.1 WRKY61,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
Solyc07g065260.4.1 AtWRKY20,... transcription factor (WRKY) 0.04 OrthoFinder output from all 47 species
Solyc09g015770.3.1 ATWRKY70,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
Solyc12g056745.1.1 ATWRKY51,... transcription factor (WRKY) 0.05 OrthoFinder output from all 47 species
Spa_g22896 ABO3, WRKY63, ATWRKY63 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g26807 WRKY6, ATWRKY6 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR003657 WRKY_dom 365 424
No external refs found!