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  5. Ppi_g52172

Ppi_g52172


Description : not classified & original description: none


Gene families : OG0005834 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005834_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g52172

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00118590 evm_27.TU.AmTr_v1... Probable plastid-lipid-associated protein 4,... 0.1 OrthoFinder output from all 47 species
Adi_g041304 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g10400 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g15037 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g04164 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Aob_g00944 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g22462 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Azfi_s0245.g059935 No alias not classified & original description: CDS=43-876 0.09 OrthoFinder output from all 47 species
Ceric.28G040000.1 Ceric.28G040000 not classified & original description: pacid=50570971... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020603.30 No alias Probable plastid-lipid-associated protein 4,... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021719.12 FIB4 No description available 0.02 OrthoFinder output from all 47 species
Cre03.g188650 No alias Probable plastid-lipid-associated protein 4,... 0.01 OrthoFinder output from all 47 species
Dac_g00501 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g42345 No alias not classified & original description: none 0.14 OrthoFinder output from all 47 species
Ehy_g17659 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
GSVIVT01022995001 No alias Probable plastid-lipid-associated protein 4,... 0.03 OrthoFinder output from all 47 species
GSVIVT01022998001 No alias Probable plastid-lipid-associated protein 4,... 0.02 OrthoFinder output from all 47 species
LOC_Os03g49720.1 LOC_Os03g49720 Probable plastid-lipid-associated protein 4,... 0.05 OrthoFinder output from all 47 species
Len_g48766 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g00639 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
MA_10435383g0010 No alias Probable plastid-lipid-associated protein 4,... 0.03 OrthoFinder output from all 47 species
Mp1g00160.1 No alias Probable plastid-lipid-associated protein 4,... 0.04 OrthoFinder output from all 47 species
Nbi_g02685 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g01288 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g35789 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g13948 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g06190 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g06191 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Solyc11g044530.2.1 Solyc11g044530 Probable plastid-lipid-associated protein 4,... 0.08 OrthoFinder output from all 47 species
Spa_g50814 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g11906 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e005397_P001 Zm00001e005397 Probable plastid-lipid-associated protein 4,... 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0004645 1,4-alpha-oligoglucan phosphorylase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008184 glycogen phosphorylase activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR006843 PAP/fibrillin_dom 70 230
No external refs found!