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  5. Ppi_g41949

Ppi_g41949


Description : histone demethylase *(PKDM8) & original description: none


Gene families : OG0002434 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002434_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g41949
Cluster HCCA: Cluster_125

Target Alias Description ECC score Gene Family Method Actions
Adi_g088261 No alias histone demethylase *(PKDM8) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g18987 No alias histone demethylase *(PKDM8) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g52529 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g31309 No alias histone demethylase *(PKDM8) & original description: none 0.04 OrthoFinder output from all 47 species
Cre02.g078700 PKDM7D RNA biosynthesis.transcriptional activation.JUMONJI... 0.01 OrthoFinder output from all 47 species
Dac_g12573 No alias histone demethylase *(PKDM8) & original description: none 0.04 OrthoFinder output from all 47 species
Gb_02799 No alias histone demethylase (PKDM8). transcription factor (JUMONJI) 0.03 OrthoFinder output from all 47 species
Gb_21111 No alias histone demethylase (PKDM8). transcription factor (JUMONJI) 0.04 OrthoFinder output from all 47 species
Len_g20483 No alias histone demethylase *(PKDM8) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0043.g012910 No alias histone demethylase *(PKDM8) & original description: CDS=45-3857 0.02 OrthoFinder output from all 47 species
Sam_g07184 No alias histone demethylase *(PKDM8) & original description: none 0.02 OrthoFinder output from all 47 species
Smo81310 No alias RNA biosynthesis.transcriptional activation.JUMONJI... 0.02 OrthoFinder output from all 47 species
Solyc08g076390.3.1 Solyc08g076390 histone demethylase (PKDM8). transcription factor (JUMONJI) 0.02 OrthoFinder output from all 47 species
Spa_g03829 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g26750 No alias histone demethylase *(PKDM8) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e012998_P005 Zm00001e012998 histone demethylase (PKDM8). transcription factor (JUMONJI) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR003349 JmjN 65 98
IPR003347 JmjC_dom 242 365
No external refs found!