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  5. Aev_g11818

Aev_g11818 (LHCA5)


Aliases : LHCA5

Description : linker protein *(LHCa5) between PS-I complex and NDH complex & original description: none


Gene families : OG0000742 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000742_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aev_g11818
Cluster HCCA: Cluster_96

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00264770 CAB4, LHCA4,... Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.02 OrthoFinder output from all 47 species
AMTR_s00013p00180670 LHCA2,... Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.02 OrthoFinder output from all 47 species
AMTR_s00131p00114510 evm_27.TU.AmTr_v1... Photosystem I chlorophyll a/b-binding protein 6,... 0.03 OrthoFinder output from all 47 species
AT1G19150 LHCA2*1, LHCA6 photosystem I light harvesting complex gene 6 0.04 OrthoFinder output from all 47 species
AT1G45474 LHCA5 photosystem I light harvesting complex gene 5 0.04 OrthoFinder output from all 47 species
Adi_g001938 LHCA2 component *(LHCa2) of LHC-I complex & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g113731 CAB4, LHCA4 component *(LHCa4) of LHC-I complex & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g00983 LHCA2 component *(LHCa2) of LHC-I complex & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g21633 CAB4, LHCA4 component *(LHCa4) of LHC-I complex & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g08471 LHCA5 linker protein *(LHCa5) between PS-I complex and NDH... 0.03 OrthoFinder output from all 47 species
Aop_g12147 LHCA2 component *(LHCa2) of LHC-I complex & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g13138 CAB4, LHCA4 component *(LHCa4) of LHC-I complex & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g36261 CAB4, LHCA4 component *(LHCa4) of LHC-I complex & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0013.g013231 CAB4, LHCA4 component *(LHCa4) of LHC-I complex & original... 0.03 OrthoFinder output from all 47 species
Cba_g01741 LHCA5 linker protein *(LHCa5) between PS-I complex and NDH... 0.02 OrthoFinder output from all 47 species
Cba_g06305 CAB4, LHCA4 component *(LHCa4) of LHC-I complex & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g36933 LHCA2 component *(LHCa2) of LHC-I complex & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.22G073900.1 LHCA2, Ceric.22G073900 component *(LHCa2) of LHC-I complex & original... 0.03 OrthoFinder output from all 47 species
Ceric.28G031700.1 LHCA2, Ceric.28G031700 component *(LHCa2) of LHC-I complex & original... 0.03 OrthoFinder output from all 47 species
Ceric.33G037200.1 CAB4, LHCA4,... component *(LHCa4) of LHC-I complex & original... 0.04 OrthoFinder output from all 47 species
Cre06.g272650 LHCA5 Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.02 OrthoFinder output from all 47 species
Cre06.g278213 CAB4, LHCA4 Chlorophyll a-b binding protein P4, chloroplastic... 0.02 OrthoFinder output from all 47 species
Cre10.g425900 CAB4, LHCA4 Chlorophyll a-b binding protein 4, chloroplastic... 0.02 OrthoFinder output from all 47 species
Dac_g21646 LHCA5 linker protein *(LHCa5) between PS-I complex and NDH... 0.03 OrthoFinder output from all 47 species
Dcu_g02371 LHCA2 component *(LHCa2) of LHC-I complex & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g09352 LHCA5 linker protein *(LHCa5) between PS-I complex and NDH... 0.05 OrthoFinder output from all 47 species
Dcu_g45197 CAB4, LHCA4 component *(LHCa4) of LHC-I complex & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g02029 CAB4, LHCA4 component *(LHCa4) of LHC-I complex & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g08226 LHCA5 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g20973 CAB4, LHCA4 component *(LHCa4) of LHC-I complex & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01007988001 CAB4, LHCA4 Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.02 OrthoFinder output from all 47 species
GSVIVT01009498001 LHCA5 Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.03 OrthoFinder output from all 47 species
GSVIVT01010483001 LHCA2 Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.03 OrthoFinder output from all 47 species
GSVIVT01015045001 LHCA2*1, LHCA6 Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.04 OrthoFinder output from all 47 species
LOC_Os02g52650.1 LHCA5, LOC_Os02g52650 component LHCa5 of LHC-I complex 0.04 OrthoFinder output from all 47 species
LOC_Os07g38960.1 LHCA2, LOC_Os07g38960 component LHCa2 of LHC-I complex 0.03 OrthoFinder output from all 47 species
LOC_Os08g33820.1 CAB4, LHCA4,... component LHCa4 of LHC-I complex 0.02 OrthoFinder output from all 47 species
LOC_Os09g26810.1 LOC_Os09g26810 component LHCa6 of LHC-I complex 0.04 OrthoFinder output from all 47 species
Len_g12015 CAB4, LHCA4 component *(LHCa4) of LHC-I complex & original description: none 0.05 OrthoFinder output from all 47 species
Len_g17260 LHCA2 component *(LHCa2) of LHC-I complex & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g00790 CAB4, LHCA4 component *(LHCa4) of LHC-I complex & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g34099 LHCA5 linker protein *(LHCa5) between PS-I complex and NDH... 0.03 OrthoFinder output from all 47 species
MA_65346g0010 CAB4, LHCA4 Chlorophyll a-b binding protein P4, chloroplastic... 0.03 OrthoFinder output from all 47 species
Mp3g07840.1 CAB4, LHCA4 component LHCa4 of LHC-I complex 0.02 OrthoFinder output from all 47 species
Mp8g13180.1 LHCA2 component LHCa2 of LHC-I complex 0.04 OrthoFinder output from all 47 species
Msp_g01556 LHCA2 component *(LHCa2) of LHC-I complex & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g04666 CAB4, LHCA4 component *(LHCa4) of LHC-I complex & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g00555 LHCA2 component *(LHCa2) of LHC-I complex & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g00735 LHCA5 linker protein *(LHCa5) between PS-I complex and NDH... 0.03 OrthoFinder output from all 47 species
Nbi_g05658 CAB4, LHCA4 component *(LHCa4) of LHC-I complex & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g07782 CAB4, LHCA4 component *(LHCa4) of LHC-I complex & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g43266 LHCA2 component *(LHCa2) of LHC-I complex & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g17334 LHCA2 component *(LHCa2) of LHC-I complex & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g19526 LHCA5 linker protein *(LHCa5) between PS-I complex and NDH... 0.03 OrthoFinder output from all 47 species
Pnu_g08290 CAB4, LHCA4 component *(LHCa4) of LHC-I complex & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c4_11854V3.1 LHCA5, Pp3c4_11854 photosystem I light harvesting complex gene 5 0.03 OrthoFinder output from all 47 species
Ppi_g18284 LHCA2 component *(LHCa2) of LHC-I complex & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g013113 CAB4, LHCA4 component *(LHCa4) of LHC-I complex & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0065.g016013 LHCA2 component *(LHCa2) of LHC-I complex & original... 0.04 OrthoFinder output from all 47 species
Sam_g16961 No alias component *(LHCa4) of LHC-I complex & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g18948 No alias linker protein *(LHCa5) between PS-I complex and NDH... 0.02 OrthoFinder output from all 47 species
Sam_g40409 No alias component *(LHCa2) of LHC-I complex & original description: none 0.03 OrthoFinder output from all 47 species
Smo403333 LHCA5 Photosystem I chlorophyll a/b-binding protein 5,... 0.02 OrthoFinder output from all 47 species
Smo446130 LHCA2 Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.03 OrthoFinder output from all 47 species
Solyc07g022900.4.1 LHCA5, Solyc07g022900 component LHCa5 of LHC-I complex 0.03 OrthoFinder output from all 47 species
Solyc10g006230.3.1 LHCA2, Solyc10g006230 component LHCa2 of LHC-I complex 0.03 OrthoFinder output from all 47 species
Solyc12g009200.2.1 LHCA2*1, LHCA6,... component LHCa6 of LHC-I complex 0.04 OrthoFinder output from all 47 species
Spa_g04946 LHCA2 component *(LHCa2) of LHC-I complex & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g08046 LHCA5 linker protein *(LHCa5) between PS-I complex and NDH... 0.02 OrthoFinder output from all 47 species
Spa_g16233 CAB4, LHCA4 component *(LHCa4) of LHC-I complex & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g29531 LHCA2 component *(LHCa2) of LHC-I complex & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g04383 CAB4, LHCA4 component *(LHCa4) of LHC-I complex & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g10537 LHCA2 component *(LHCa2) of LHC-I complex & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e009885_P001 LHCA2*1, LHCA6,... component LHCa6 of LHC-I complex 0.03 OrthoFinder output from all 47 species
Zm00001e015945_P001 LHCA5, Zm00001e015945 component LHCa5 of LHC-I complex 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
MF GO:0004751 ribose-5-phosphate isomerase activity IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 79 247
No external refs found!