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  5. Ppi_g28043

Ppi_g28043


Description : A1-class (Pepsin) protease & original description: none


Gene families : OG0002524 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002524_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g28043
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
AT3G51330 No alias Eukaryotic aspartyl protease family protein 0.02 OrthoFinder output from all 47 species
AT5G10080 No alias Eukaryotic aspartyl protease family protein 0.07 OrthoFinder output from all 47 species
Aob_g01981 No alias A1-class (Pepsin) protease & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09892 No alias A1-class (Pepsin) protease & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0656.g081119 No alias A1-class (Pepsin) protease & original description: CDS=322-1830 0.03 OrthoFinder output from all 47 species
Ceric.32G039300.1 Ceric.32G039300 A1-class (Pepsin) protease & original description:... 0.07 OrthoFinder output from all 47 species
Dac_g17923 No alias A1-class (Pepsin) protease & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g05013 No alias A1-class (Pepsin) protease & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008978001 No alias Protein degradation.peptidase families.aspartic-type... 0.03 OrthoFinder output from all 47 species
LOC_Os02g51540.1 LOC_Os02g51540 pepsin-type protease 0.05 OrthoFinder output from all 47 species
LOC_Os06g50390.1 LOC_Os06g50390 pepsin-type protease 0.02 OrthoFinder output from all 47 species
MA_59317g0010 No alias pepsin-type protease 0.01 OrthoFinder output from all 47 species
Mp5g18190.1 No alias pepsin-type protease 0.02 OrthoFinder output from all 47 species
Msp_g00602 No alias A1-class (Pepsin) protease & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g33980 No alias A1-class (Pepsin) protease & original description: none 0.06 OrthoFinder output from all 47 species
Pp3c22_10540V3.1 Pp3c22_10540 Eukaryotic aspartyl protease family protein 0.01 OrthoFinder output from all 47 species
Spa_g01343 No alias A1-class (Pepsin) protease & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06591 No alias A1-class (Pepsin) protease & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e013296_P001 Zm00001e013296 pepsin-type protease 0.02 OrthoFinder output from all 47 species
Zm00001e023878_P004 Zm00001e023878 pepsin-type protease 0.04 OrthoFinder output from all 47 species
Zm00001e029902_P001 Zm00001e029902 pepsin-type protease 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0001510 RNA methylation IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008649 rRNA methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016436 rRNA (uridine) methyltransferase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0031167 rRNA methylation IEP HCCA
BP GO:0032259 methylation IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
MF GO:0070042 rRNA (uridine-N3-)-methyltransferase activity IEP HCCA
BP GO:0070475 rRNA base methylation IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140102 catalytic activity, acting on a rRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR032799 TAXi_C 325 463
IPR032861 TAXi_N 126 304
No external refs found!