Heatmap: Cluster_26 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log₂ transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene	Sterile Frond	Fertile Frond	Young Stem with Root	Mature Stem with Root	Root
Ppi_g00753 (CCR1)	-5.84	0.97	1.31	-1.98	-1.78
Ppi_g00821 (GLIP7)	-	0.91	1.62	-4.56	-
Ppi_g00827	-1.15	0.48	1.33	-1.51	-1.79
Ppi_g00866	-0.97	0.49	0.88	-0.89	-0.5
Ppi_g00880 (HHP1)	-4.2	0.93	1.45	-2.0	-4.2
Ppi_g01046	-3.1	0.19	1.32	-0.43	-1.0
Ppi_g01096 (XT2)	-	0.47	1.52	-1.84	-1.11
Ppi_g01831	-4.97	0.29	1.33	-1.26	-0.3
Ppi_g02138 (ARI3)	-1.75	0.16	1.06	-0.4	-0.44
Ppi_g02176	-3.94	0.46	1.61	-1.21	-3.88
Ppi_g02274	-3.85	0.93	1.21	-1.45	-1.48
Ppi_g02310 (PUB45)	-7.34	0.65	1.41	-1.35	-1.44
Ppi_g02698	-	0.74	1.36	-2.06	-0.92
Ppi_g02833 (RAD51)	-6.41	0.53	1.5	-2.46	-0.91
Ppi_g02911 (XRI)	-6.32	0.33	1.71	-2.91	-1.64
Ppi_g02984	-5.48	0.87	1.38	-1.43	-2.58
Ppi_g03282 (TOPII)	-9.72	0.46	1.63	-2.68	-1.46
Ppi_g03352	-	0.59	1.64	-2.94	-2.02
Ppi_g03641	-	0.97	1.47	-3.84	-2.35
Ppi_g03827 (PK5)	-3.41	0.47	1.54	-1.12	-2.61
Ppi_g04177	-1.3	0.48	1.28	-1.14	-1.64
Ppi_g04421	-	0.89	1.58	-2.89	-6.24
Ppi_g04521 (IQD6)	-2.61	0.26	1.54	-1.11	-1.84
Ppi_g04985 (DUT1)	-4.3	0.68	1.24	-1.34	-0.78
Ppi_g05773 (MAN7)	-	0.87	1.5	-2.54	-2.55
Ppi_g05889	-3.89	0.34	1.66	-2.29	-1.67
Ppi_g05934 (RB)	-1.0	0.13	1.01	-0.53	-0.52
Ppi_g05946 (EXS)	-9.61	0.55	1.34	-0.36	-2.2
Ppi_g06956 (GRF5)	-2.46	0.83	1.19	-0.48	-4.81
Ppi_g07353	-3.23	0.62	1.55	-1.98	-2.47
Ppi_g07385	-0.56	0.48	0.83	-0.72	-0.87
Ppi_g07479 (BGLU42)	-4.38	0.7	1.6	-2.45	-3.07
Ppi_g07485	-3.21	0.26	1.54	-1.87	-0.97
Ppi_g07568 (DSO)	-6.39	1.13	1.36	-2.18	-6.5
Ppi_g07681	-	0.73	1.72	-4.12	-
Ppi_g08154 (BRS1)	-2.51	0.78	1.58	-3.37	-5.63
Ppi_g08263	-1.64	0.57	1.35	-1.15	-2.29
Ppi_g08886	-6.01	1.06	1.38	-1.86	-5.3
Ppi_g08965 (ATML1)	-1.45	0.51	1.35	-0.72	-4.32
Ppi_g09315	-3.53	0.78	1.52	-1.58	-
Ppi_g09364	-	0.67	1.47	-1.88	-1.48
Ppi_g09575	-	0.28	1.69	-0.93	-5.01
Ppi_g09690	-3.87	0.21	1.41	-1.77	-0.29
Ppi_g09884	-3.29	0.57	1.5	-1.98	-1.64
Ppi_g10382	-1.88	0.73	1.15	-1.51	-1.0
Ppi_g10849	-4.01	0.59	1.6	-1.75	-3.36
Ppi_g11148 (PG2)	-4.42	0.72	1.52	-1.63	-3.24
Ppi_g11337	-5.47	0.4	1.64	-1.72	-2.14
Ppi_g11582	-	0.31	1.65	-3.05	-1.0
Ppi_g11661	-	0.58	1.68	-3.21	-2.31
Ppi_g11876 (HIPP20)	-	0.85	1.49	-2.02	-2.72
Ppi_g11937 (CYCD3)	-5.71	0.83	1.25	-1.61	-1.0
Ppi_g12038 (YRE)	-5.39	0.92	1.47	-1.73	-5.45
Ppi_g12415	-3.42	0.41	1.31	-0.98	-0.74
Ppi_g12637 (DSO)	-5.99	0.76	1.46	-0.97	-5.29
Ppi_g12699 (CHR1)	-8.5	0.4	1.55	-1.54	-1.3
Ppi_g13063	-3.57	0.28	1.57	-1.54	-1.34
Ppi_g13186 (SHM4)	-0.72	0.35	0.76	-0.68	-0.31
Ppi_g13719	-1.8	0.42	1.45	-1.66	-1.57
Ppi_g13963 (KCS1)	-	1.09	1.42	-2.27	-
Ppi_g14551 (IMK2)	-6.03	0.56	1.59	-1.94	-2.07
Ppi_g14818	-1.61	0.7	1.43	-2.54	-2.51
Ppi_g15072	-6.66	0.39	1.51	-1.03	-1.51
Ppi_g15107	-1.3	0.55	1.16	-0.95	-1.41
Ppi_g15316 (MYB16)	-1.29	0.53	1.45	-1.51	-4.05
Ppi_g15482	-0.93	0.35	0.99	-0.52	-0.94
Ppi_g15719	-6.09	0.09	1.31	-0.36	-0.59
Ppi_g16459	-3.13	0.26	1.22	-0.87	-0.29
Ppi_g16905 (TBL21)	-5.6	0.67	1.43	-1.8	-1.28
Ppi_g17118 (KCS4)	-4.34	0.77	1.65	-3.37	-6.29
Ppi_g17366	-2.55	0.82	1.37	-1.74	-2.52
Ppi_g17562 (PDF2)	-8.4	0.93	1.51	-2.2	-5.7
Ppi_g17731	-6.67	0.81	1.37	-1.07	-2.45
Ppi_g17903	-	0.39	1.64	-2.61	-1.28
Ppi_g18112 (EXS)	-3.77	0.71	1.45	-1.58	-2.2
Ppi_g18267	-	0.81	1.61	-2.34	-
Ppi_g18317	-0.72	0.2	0.85	-0.61	-0.35
Ppi_g18613	-2.72	0.39	1.36	-0.59	-1.73
Ppi_g18686 (ACT7)	-4.99	0.88	1.56	-2.8	-4.46
Ppi_g19371 (HOG1)	-2.08	0.69	1.17	-1.41	-0.96
Ppi_g19893	-	0.57	1.73	-2.29	-
Ppi_g19985 (TET8)	-	0.38	1.81	-3.02	-3.77
Ppi_g22065 (CCoAOMT1)	-4.72	0.75	1.53	-1.84	-3.14
Ppi_g26898	-4.72	0.72	1.64	-2.5	-5.27
Ppi_g27127 (LOB)	-6.15	0.62	1.36	-0.95	-1.44
Ppi_g27577	-2.31	0.88	1.32	-1.24	-4.27
Ppi_g28043	-3.53	0.49	1.54	-1.45	-2.1
Ppi_g28684	-0.68	0.45	0.88	-0.88	-0.69
Ppi_g28844	-2.79	0.34	1.46	-1.5	-1.06
Ppi_g29857 (SD2-5)	-0.52	0.14	0.93	-0.33	-0.99
Ppi_g30723	-	0.8	1.51	-1.48	-4.36
Ppi_g30863 (PLP6)	-2.38	0.26	1.16	-0.33	-0.8
Ppi_g32112	-1.56	0.34	1.17	-0.61	-1.05
Ppi_g32192	-	0.87	1.49	-1.98	-3.21
Ppi_g32226	-5.89	0.88	1.49	-2.83	-2.41
Ppi_g32324	-5.69	0.79	1.23	-1.46	-0.87
Ppi_g32627	-2.04	0.77	1.36	-1.62	-2.66
Ppi_g32699 (APG5)	-0.45	0.22	0.68	-0.49	-0.35
Ppi_g32829	-2.75	0.33	1.58	-1.43	-2.14
Ppi_g33037 (ALDH4)	-3.51	0.9	1.38	-1.51	-3.55
Ppi_g38738	-3.5	0.32	1.81	-4.61	-3.04
Ppi_g39288 (EXP10)	-6.68	0.94	1.46	-2.88	-2.48
Ppi_g39320 (UGT85A7)	-2.78	0.52	1.2	-0.81	-0.83
Ppi_g41343 (PYD3)	-0.4	0.15	0.68	-0.39	-0.39
Ppi_g43739	-5.66	0.25	1.5	-1.72	-0.62
Ppi_g44720	-1.71	0.51	1.41	-0.87	-4.03
Ppi_g46959	-1.65	0.63	1.29	-1.45	-1.61
Ppi_g48206	-2.36	0.54	1.1	-0.53	-0.96
Ppi_g52182	-2.4	0.82	1.13	-1.33	-1.15
Ppi_g52804	-1.04	0.49	1.36	-0.98	-4.76
Ppi_g54178	-4.64	0.55	1.46	-0.57	-3.66
Ppi_g55815	-1.03	0.51	1.33	-1.54	-2.18
Ppi_g57381 (IQD3)	-2.7	0.65	1.59	-2.5	-3.59
Ppi_g58169	-2.6	0.87	1.42	-1.74	-4.79
Ppi_g59175	-	1.07	1.19	-2.2	-1.32
Ppi_g59208	-4.13	0.59	1.64	-2.83	-2.55
Ppi_g59742	-3.3	0.96	1.41	-2.64	-2.87
Ppi_g60363 (YUC9)	-4.33	0.24	1.33	-0.99	-0.4
Ppi_g60472	-3.32	0.36	1.51	-1.0	-1.87
Ppi_g60508	-6.05	0.4	1.83	-3.85	-4.54
Ppi_g61062 (KP1)	-6.28	0.43	1.56	-2.37	-1.0
Ppi_g61731 (DWF7)	-	0.96	1.57	-3.72	-
Ppi_g62059	-0.7	0.28	0.69	-0.26	-0.47
Ppi_g62195 (GH9C2)	-5.05	0.98	1.54	-4.19	-4.8
Ppi_g62196	-6.51	0.62	1.76	-5.29	-4.45
Ppi_g62348	-1.04	0.19	1.04	-0.24	-1.1
Ppi_g62764	-	0.59	1.6	-2.19	-2.03
Ppi_g62772	-5.22	0.51	1.64	-2.08	-2.36
Ppi_g63211	-5.84	0.32	1.6	-1.23	-1.84
Ppi_g63350 (sks5)	-	0.98	1.46	-2.51	-3.21
Ppi_g63404	-5.26	0.67	1.47	-1.41	-2.05
Ppi_g63529 (GH9C2)	-5.48	0.84	1.62	-4.12	-4.03
Ppi_g63533	-5.3	0.79	1.33	-0.55	-4.25

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.