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  5. Ppi_g26540

Ppi_g26540


Description : not classified & original description: none


Gene families : OG0000140 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000140_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g26540
Cluster HCCA: Cluster_271

Target Alias Description ECC score Gene Family Method Actions
Aob_g38409 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g39274 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g39302 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g43307 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g45020 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g21670 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g16612 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g21290 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g21622 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g24296 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g27034 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g28269 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g38354 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g49773 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g36701 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0004568 chitinase activity IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006030 chitin metabolic process IEP HCCA
BP GO:0006032 chitin catabolic process IEP HCCA
BP GO:0006040 amino sugar metabolic process IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0046348 amino sugar catabolic process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:1901071 glucosamine-containing compound metabolic process IEP HCCA
BP GO:1901072 glucosamine-containing compound catabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR022234 DUF3759 10 98
No external refs found!