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  5. Ppi_g24073

Ppi_g24073


Description : RNA editing factor *(MEF14) & original description: none


Gene families : OG0003511 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003511_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g24073

Target Alias Description ECC score Gene Family Method Actions
Aev_g35289 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g11614 No alias RNA editing factor *(MEF14) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g19177 No alias RNA editing factor *(MEF14) & original description: none 0.09 OrthoFinder output from all 47 species
Aspi01Gene29680.t1 Aspi01Gene29680 RNA editing factor *(MEF14) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.04G012700.1 Ceric.04G012700 RNA editing factor *(MEF14) & original description:... 0.05 OrthoFinder output from all 47 species
Len_g13638 No alias RNA editing factor *(MEF14) & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g18987 No alias RNA editing factor *(MEF14) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g09051 No alias RNA editing factor *(MEF14) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g09690 No alias RNA editing factor *(MEF14) & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g00590 No alias RNA editing factor *(MEF14) & original description: none 0.11 OrthoFinder output from all 47 species
Nbi_g38796 No alias RNA editing factor *(MEF14) & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g28201 No alias RNA editing factor *(MEF14) & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0130.g022011 No alias RNA editing factor *(MEF14) & original description: CDS=51-1046 0.04 OrthoFinder output from all 47 species
Spa_g04763 No alias RNA editing factor *(MEF14) & original description: none 0.11 OrthoFinder output from all 47 species
Tin_g05889 No alias RNA ediTing factor *(MEF14) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g11065 No alias RNA ediTing factor *(MEF14) & original description: none 0.07 OrthoFinder output from all 47 species
Zm00001e021512_P002 Zm00001e021512 RNA editing factor (MEF14) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004097 catechol oxidase activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR013078 His_Pase_superF_clade-1 31 168
IPR013078 His_Pase_superF_clade-1 260 322
No external refs found!