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  5. Aev_g10172

Aev_g10172


Description : regulatory factor *(RIQ) of thylakoid grana stacking & original description: none


Gene families : OG0004759 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004759_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aev_g10172
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00154p00066950 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT5G08050 No alias Protein of unknown function (DUF1118) 0.05 OrthoFinder output from all 47 species
Adi_g021665 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.1 OrthoFinder output from all 47 species
Adi_g046840 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.1 OrthoFinder output from all 47 species
Adi_g110043 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.04 OrthoFinder output from all 47 species
Ala_g00963 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.02 OrthoFinder output from all 47 species
Als_g04124 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.08 OrthoFinder output from all 47 species
Aob_g09320 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.05 OrthoFinder output from all 47 species
Aob_g42691 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Aop_g09516 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.08 OrthoFinder output from all 47 species
Aspi01Gene19483.t1 Aspi01Gene19483 regulatory factor *(RIQ) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Azfi_s0038.g026304 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.04 OrthoFinder output from all 47 species
Cba_g04313 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.08 OrthoFinder output from all 47 species
Ceric.34G020000.1 Ceric.34G020000 regulatory factor *(RIQ) of thylakoid grana stacking &... 0.09 OrthoFinder output from all 47 species
Dac_g00528 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.08 OrthoFinder output from all 47 species
Dcu_g47527 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.09 OrthoFinder output from all 47 species
Dde_g01981 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.07 OrthoFinder output from all 47 species
Ehy_g02092 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.1 OrthoFinder output from all 47 species
GSVIVT01008106001 No alias No description available 0.04 OrthoFinder output from all 47 species
LOC_Os12g38640.1 LOC_Os12g38640 no hits & (original description: none) 0.12 OrthoFinder output from all 47 species
Len_g11447 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.04 OrthoFinder output from all 47 species
Len_g44742 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.07 OrthoFinder output from all 47 species
Lfl_g03718 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Mp1g29140.1 No alias no hits & (original description: none) 0.15 OrthoFinder output from all 47 species
Msp_g08411 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.07 OrthoFinder output from all 47 species
Nbi_g08483 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.07 OrthoFinder output from all 47 species
Pir_g59758 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.02 OrthoFinder output from all 47 species
Pnu_g10046 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.08 OrthoFinder output from all 47 species
Sacu_v1.1_s0091.g018867 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.05 OrthoFinder output from all 47 species
Smo415599 No alias No description available 0.03 OrthoFinder output from all 47 species
Spa_g03718 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.05 OrthoFinder output from all 47 species
Spa_g04667 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.07 OrthoFinder output from all 47 species
Tin_g15216 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.1 OrthoFinder output from all 47 species
Zm00001e002989_P001 Zm00001e002989 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0071586 CAAX-box protein processing IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR009500 DUF1118 100 212
No external refs found!