LOC_Os11g13920.1


Description : Replication protein A 70 kDa DNA-binding subunit B OS=Oryza sativa subsp. japonica (sp|q10q08|rfa1b_orysj : 82.8)


Gene families : OG_01_0000538 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000538_tree ,
OG_02_0000814 (LandPlants) Phylogenetic Tree(s): OG_02_0000814_tree ,
OG_03_0000441 (SeedPlants) Phylogenetic Tree(s): OG_03_0000441_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g13920.1
Cluster HCCA: Cluster_136

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g44200.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os06g38770.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os11g44830.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os12g32690.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os06g38770.1 No alias no hits & (original description: none) 0.03 LandPlants
LOC_Os11g44830.1 No alias no hits & (original description: none) 0.03 LandPlants
LOC_Os12g06230.1 No alias no hits & (original description: none) 0.03 LandPlants
LOC_Os12g32690.1 No alias no hits & (original description: none) 0.04 LandPlants
LOC_Os01g14200.1 No alias no hits & (original description: none) 0.03 SeedPlants
LOC_Os01g37580.1 No alias Replication protein A 70 kDa DNA-binding subunit B... 0.03 SeedPlants
LOC_Os11g44830.1 No alias no hits & (original description: none) 0.03 SeedPlants
LOC_Os12g06230.1 No alias no hits & (original description: none) 0.03 SeedPlants
LOC_Os12g32690.1 No alias no hits & (original description: none) 0.04 SeedPlants

Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEA Interproscan
MF GO:0003678 DNA helicase activity IEA Interproscan
BP GO:0006281 DNA repair IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR025476 Helitron_helicase-like 436 619
IPR031657 REPA_OB_2 1707 1794
IPR010285 DNA_helicase_pif1-like 1081 1451
No external refs found!