1. Home
  2. Species
  3. Pyrrosia piloselloides
  4. Sequence
  5. Ppi_g17330

Ppi_g17330


Description : regulatory protein of RNA homeostasis & original description: none


Gene families : OG0000614 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000614_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g17330

Target Alias Description ECC score Gene Family Method Actions
AT1G32360 No alias Zinc finger (CCCH-type) family protein 0.02 OrthoFinder output from all 47 species
Adi_g059542 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Adi_g101999 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g13331 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g02256 No alias regulatory protein *(KHZ) of autonomous floral-promotion... 0.02 OrthoFinder output from all 47 species
Aspi01Gene52686.t1 Aspi01Gene52686 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0017.g014471 No alias not classified & original description: CDS=103-1737 0.04 OrthoFinder output from all 47 species
Cba_g74371 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.38G012000.1 Ceric.38G012000 not classified & original description: pacid=50579791... 0.02 OrthoFinder output from all 47 species
Cre11.g476200 No alias No description available 0.02 OrthoFinder output from all 47 species
Ehy_g13206 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Gb_34650 No alias C3H zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Lfl_g16999 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Ore_g23447 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0240.g026606 No alias regulatory protein of RNA homeostasis & original... 0.04 OrthoFinder output from all 47 species
Sam_g26314 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g28481 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g15337 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e025892_P001 Zm00001e025892 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0002161 aminoacyl-tRNA editing activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030118 clathrin coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030125 clathrin vesicle coat IEP HCCA
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP HCCA
CC GO:0030132 clathrin coat of coated pit IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 299 324
IPR000571 Znf_CCCH 158 183
IPR041367 Znf-CCCH_4 237 259
No external refs found!