Aliases : APUM12, PUM12
Description : not classified & original description: none
Gene families : OG0000858 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000858_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Ala_g18476 | APUM12, PUM12 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g03238 | APUM12, PUM12 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Cba_g15341 | APUM12, PUM12 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01033396001 | APUM12, PUM12 | Pumilio homolog 12 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
Tin_g38740 | PUM7, APUM7 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | HCCA |
MF | GO:0003743 | translation initiation factor activity | IEP | HCCA |
MF | GO:0003824 | catalytic activity | IEP | HCCA |
MF | GO:0005506 | iron ion binding | IEP | HCCA |
MF | GO:0005524 | ATP binding | IEP | HCCA |
CC | GO:0005852 | eukaryotic translation initiation factor 3 complex | IEP | HCCA |
BP | GO:0006413 | translational initiation | IEP | HCCA |
BP | GO:0006810 | transport | IEP | HCCA |
BP | GO:0006812 | monoatomic cation transport | IEP | HCCA |
BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
BP | GO:0008104 | protein localization | IEP | HCCA |
MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
BP | GO:0008150 | biological_process | IEP | HCCA |
BP | GO:0008610 | lipid biosynthetic process | IEP | HCCA |
BP | GO:0009987 | cellular process | IEP | HCCA |
BP | GO:0015031 | protein transport | IEP | HCCA |
MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
MF | GO:0016758 | hexosyltransferase activity | IEP | HCCA |
MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
MF | GO:0019899 | enzyme binding | IEP | HCCA |
BP | GO:0030001 | metal ion transport | IEP | HCCA |
MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
MF | GO:0031267 | small GTPase binding | IEP | HCCA |
MF | GO:0031369 | translation initiation factor binding | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
BP | GO:0033036 | macromolecule localization | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
MF | GO:0036094 | small molecule binding | IEP | HCCA |
MF | GO:0043167 | ion binding | IEP | HCCA |
MF | GO:0043168 | anion binding | IEP | HCCA |
MF | GO:0043169 | cation binding | IEP | HCCA |
MF | GO:0045182 | translation regulator activity | IEP | HCCA |
BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
MF | GO:0046872 | metal ion binding | IEP | HCCA |
MF | GO:0046873 | metal ion transmembrane transporter activity | IEP | HCCA |
BP | GO:0046907 | intracellular transport | IEP | HCCA |
MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
MF | GO:0051020 | GTPase binding | IEP | HCCA |
BP | GO:0051179 | localization | IEP | HCCA |
BP | GO:0051234 | establishment of localization | IEP | HCCA |
BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
BP | GO:0071702 | organic substance transport | IEP | HCCA |
BP | GO:0071705 | nitrogen compound transport | IEP | HCCA |
MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001313 | Pumilio_RNA-bd_rpt | 644 | 674 |
IPR001313 | Pumilio_RNA-bd_rpt | 755 | 788 |
IPR001313 | Pumilio_RNA-bd_rpt | 720 | 752 |
IPR001313 | Pumilio_RNA-bd_rpt | 827 | 861 |
IPR001313 | Pumilio_RNA-bd_rpt | 685 | 711 |
IPR001313 | Pumilio_RNA-bd_rpt | 794 | 811 |
IPR001313 | Pumilio_RNA-bd_rpt | 608 | 641 |
IPR001313 | Pumilio_RNA-bd_rpt | 865 | 899 |
No external refs found! |