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  5. Ppi_g17078

Ppi_g17078 (TTL1)


Aliases : TTL1

Description : not classified & original description: none


Gene families : OG0000939 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000939_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g17078
Cluster HCCA: Cluster_145

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00076440 TTL1,... TPR repeat-containing thioredoxin TTL1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00174p00014780 TTL3, VIT,... Inactive TPR repeat-containing thioredoxin TTL3... 0.03 OrthoFinder output from all 47 species
AT1G53300 TTL1 tetratricopetide-repeat thioredoxin-like 1 0.05 OrthoFinder output from all 47 species
AT5G10090 TPR13 Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g081368 TTL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g06190 TTL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g26452 TTL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g32635 TTL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08772 TTL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g09603 TTL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g10921 TTL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13784 TTL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene34061.t1 TTL1, Aspi01Gene34061 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene65859.t1 TTL1, Aspi01Gene65859 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g14242 TTL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g27581 TTL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G088900.1 TTL3, VIT,... not classified & original description: pacid=50584923... 0.04 OrthoFinder output from all 47 species
Ceric.27G040400.1 TTL3, VIT,... not classified & original description: pacid=50605732... 0.03 OrthoFinder output from all 47 species
Dac_g14546 TTL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g22529 TTL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g07058 TTL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01005875001 TPR14 TPR repeat-containing thioredoxin TTL1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01009014001 TPR14 TPR repeat-containing thioredoxin TTL1 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
GSVIVT01014216001 TTL1 TPR repeat-containing thioredoxin TTL1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01020699001 TTL3, VIT Inactive TPR repeat-containing thioredoxin TTL3... 0.02 OrthoFinder output from all 47 species
Gb_36115 TTL1 scaffold protein (TTL) of brassinosteroid signalling 0.03 OrthoFinder output from all 47 species
LOC_Os01g42960.1 TTL1, LOC_Os01g42960 scaffold protein (TTL) of brassinosteroid signalling 0.02 OrthoFinder output from all 47 species
LOC_Os05g11990.1 TTL1, LOC_Os05g11990 TPR repeat-containing thioredoxin TTL1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os05g50990.1 TTL4, LOC_Os05g50990 scaffold protein (TTL) of brassinosteroid signalling 0.02 OrthoFinder output from all 47 species
MA_10426265g0010 TTL1 scaffold protein (TTL) of brassinosteroid signalling 0.04 OrthoFinder output from all 47 species
MA_93105g0010 TTL1 scaffold protein (TTL) of brassinosteroid signalling 0.02 OrthoFinder output from all 47 species
Mp6g04200.1 TTL1 TPR repeat-containing thioredoxin TTL1 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
Msp_g32641 TTL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g35116 TTL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g42710 TTL1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g07534 TTL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g09362 TTL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g44638 TTL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g001174 TTL1 not classified & original description: CDS=524-3337 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0270.g027013 TTL1 not classified & original description: CDS=784-3654 0.03 OrthoFinder output from all 47 species
Smo168306 TTL1 TPR repeat-containing thioredoxin TTL1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Spa_g04571 TTL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g09257 TTL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g16173 TTL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g10854 TTL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14806 TTL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e026052_P001 TTL1, Zm00001e026052 scaffold protein (TTL) of brassinosteroid signalling 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0007155 cell adhesion IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 931 1006
No external refs found!