Aliases : ARF16
Description : ARF-type transcription factor & original description: none
Gene families : OG0000088 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000088_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Ppi_g15530 | |
Cluster | HCCA: Cluster_73 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Ala_g02130 | ARF16 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aob_g22075 | ARF6 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g08691 | ARF6 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g22354 | ARF6 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Len_g10088 | ARF10 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pir_g08351 | ARF16 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0003.g001668 | ARF1 | ARF-type transcription factor & original description: CDS=1-2553 | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0032.g010740 | TIR5, MSG1,... | ARF-type transcription factor & original description: CDS=1-2400 | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0084.g018261 | TIR5, MSG1,... | not classified & original description: CDS=484-2670 | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0090.g018749 | ARF10 | not classified & original description: CDS=44-817 | 0.04 | OrthoFinder output from all 47 species | |
Spa_g39677 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e030290_P005 | ARF16, Zm00001e030290 | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
CC | GO:0005634 | nucleus | IEA | Interproscan |
BP | GO:0006355 | regulation of DNA-templated transcription | IEA | Interproscan |
BP | GO:0009725 | response to hormone | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
MF | GO:0008168 | methyltransferase activity | IEP | HCCA |
MF | GO:0016740 | transferase activity | IEP | HCCA |
MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | HCCA |
MF | GO:0043565 | sequence-specific DNA binding | IEP | HCCA |
MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
No external refs found! |