LOC_Os11g05700.1


Description : subfamily ABCC transporter


Gene families : OG_01_0000058 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000058_tree ,
OG_02_0000363 (LandPlants) Phylogenetic Tree(s): OG_02_0000363_tree ,
OG_03_0001693 (SeedPlants) Phylogenetic Tree(s): OG_03_0001693_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g05700.1
Cluster HCCA: Cluster_108

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00219490 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.02 Archaeplastida
AMTR_s00056p00223220 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.02 Archaeplastida
AMTR_s00507p00011670 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.02 Archaeplastida
AT1G30400 ABCC1, ATABCC1,... multidrug resistance-associated protein 1 0.03 Archaeplastida
AT1G30420 ATMRP12, MRP12, ABCC11 multidrug resistance-associated protein 12 0.04 Archaeplastida
AT3G13080 ABCC3, ATMRP3, MRP3 multidrug resistance-associated protein 3 0.02 Archaeplastida
AT3G13100 ABCC7, ATMRP7, MRP7 multidrug resistance-associated protein 7 0.06 Archaeplastida
Cpa|evm.model.tig00000718.2 No alias ABC transporter C family member 2 OS=Arabidopsis thaliana 0.01 Archaeplastida
Cpa|evm.model.tig00000718.3 No alias ABC transporter C family member 6 OS=Arabidopsis thaliana 0.01 Archaeplastida
Cpa|evm.model.tig00001729.6 No alias Solute transport.primary active transport.ABC... 0.01 Archaeplastida
Cpa|evm.model.tig00020554.164 No alias Solute transport.primary active transport.ABC... 0.01 Archaeplastida
Cpa|evm.model.tig00020684.9 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
Cre13.g564900 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
Cre17.g734612 No alias ABC transporter C family member 14 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01010326001 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida
GSVIVT01016879001 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida
GSVIVT01019475001 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
GSVIVT01021595001 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida
GSVIVT01028440001 No alias Solute transport.primary active transport.ABC... 0.01 Archaeplastida
GSVIVT01028722001 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
GSVIVT01037789001 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida
Gb_05522 No alias subfamily ABCC transporter 0.01 Archaeplastida
Gb_14726 No alias ABC transporter C family member 8 OS=Arabidopsis... 0.04 Archaeplastida
Gb_36600 No alias subfamily ABCC transporter 0.02 Archaeplastida
Gb_38867 No alias subfamily ABCC transporter 0.02 Archaeplastida
LOC_Os04g13220.1 No alias subfamily ABCC transporter 0.04 Archaeplastida
LOC_Os04g49890.1 No alias subfamily ABCC transporter 0.03 Archaeplastida
MA_10436190g0020 No alias ABC transporter C family member 10 OS=Arabidopsis... 0.04 Archaeplastida
MA_10436190g0030 No alias ABC transporter C family member 10 OS=Arabidopsis... 0.05 Archaeplastida
MA_10436190g0040 No alias ABC transporter C family member 10 OS=Arabidopsis... 0.04 Archaeplastida
MA_138036g0010 No alias subfamily ABCC transporter 0.03 Archaeplastida
MA_602830g0010 No alias ABC transporter C family member 10 OS=Arabidopsis... 0.04 Archaeplastida
MA_629244g0010 No alias subfamily ABCC transporter 0.08 Archaeplastida
Mp4g11790.1 No alias subfamily ABCC transporter 0.02 Archaeplastida
Mp4g11950.1 No alias subfamily ABCC transporter 0.05 Archaeplastida
Mp4g15590.1 No alias subfamily ABCC transporter 0.01 Archaeplastida
Mp5g02230.1 No alias subfamily ABCC transporter 0.03 Archaeplastida
Mp5g13190.1 No alias subfamily ABCC transporter 0.03 Archaeplastida
Mp5g13230.1 No alias subfamily ABCC transporter 0.03 Archaeplastida
Mp7g13400.1 No alias subfamily ABCC transporter 0.02 Archaeplastida
Mp7g13860.1 No alias subfamily ABCC transporter 0.06 Archaeplastida
Pp3c13_18050V3.1 No alias multidrug resistance-associated protein 5 0.01 Archaeplastida
Pp3c8_18670V3.1 No alias multidrug resistance-associated protein 10 0.03 Archaeplastida
Smo144775 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
Smo163772 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
Smo163776 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
Smo165716 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
Smo171469 No alias Solute transport.primary active transport.ABC... 0.01 Archaeplastida
Smo267218 No alias Solute transport.primary active transport.ABC... 0.04 Archaeplastida
Smo402326 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
Smo409191 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
Smo81581 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
Smo94 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
Solyc01g080640.3.1 No alias subfamily ABCC transporter 0.05 Archaeplastida
Solyc07g065320.4.1 No alias subfamily ABCC transporter 0.07 Archaeplastida
Solyc08g006880.3.1 No alias subfamily ABCC transporter 0.02 Archaeplastida
Solyc10g024420.3.1 No alias subfamily ABCC transporter 0.05 Archaeplastida
Zm00001e003542_P001 No alias subfamily ABCC transporter 0.03 Archaeplastida
Zm00001e026288_P002 No alias subfamily ABCC transporter 0.04 Archaeplastida
Zm00001e038918_P002 No alias subfamily ABCC transporter 0.06 Archaeplastida
Zm00001e040598_P001 No alias No annotation 0.03 Archaeplastida
GSVIVT01028722001 No alias Solute transport.primary active transport.ABC... 0.02 LandPlants
Gb_14726 No alias ABC transporter C family member 8 OS=Arabidopsis... 0.02 LandPlants
MA_10436190g0030 No alias ABC transporter C family member 10 OS=Arabidopsis... 0.02 LandPlants
MA_629244g0010 No alias subfamily ABCC transporter 0.03 LandPlants
Smo165716 No alias Solute transport.primary active transport.ABC... 0.02 LandPlants
Zm00001e003542_P001 No alias subfamily ABCC transporter 0.03 LandPlants
GSVIVT01028722001 No alias Solute transport.primary active transport.ABC... 0.02 SeedPlants
Zm00001e003542_P001 No alias subfamily ABCC transporter 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0016887 ATPase activity IEA Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR011527 ABC1_TM_dom 131 380
IPR003439 ABC_transporter-like 461 609
No external refs found!