Aev_g09311

Description : component *(SMG8) of SMG1C protein kinase complex & original description: none

Gene families : OG0006988 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006988_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aev_g09311

Target	Alias	Description	ECC score	Gene Family Method
Adi_g104723	No alias	component *(SMG8) of SMG1C protein kinase complex &...	0.02	OrthoFinder output from all 47 species
Ala_g21960	No alias	component *(SMG8) of SMG1C protein kinase complex &...	0.03	OrthoFinder output from all 47 species
Aob_g28222	No alias	component *(SMG8) of SMG1C protein kinase complex &...	0.03	OrthoFinder output from all 47 species
Azfi_s0292.g063372	No alias	component *(SMG8) of SMG1C protein kinase complex &...	0.04	OrthoFinder output from all 47 species
Len_g35816	No alias	component *(SMG8) of SMG1C protein kinase complex &...	0.02	OrthoFinder output from all 47 species
Lfl_g06757	No alias	component *(SMG8) of SMG1C protein kinase complex &...	0.02	OrthoFinder output from all 47 species
MA_10431872g0010	No alias	component SMG8 of SMG1C protein kinase complex	0.02	OrthoFinder output from all 47 species
Pir_g63906	No alias	component *(SMG8) of SMG1C protein kinase complex &...	0.05	OrthoFinder output from all 47 species
Tin_g44354	No alias	component *(SMG8) of SMG1C protein kinase complex &...	0.03	OrthoFinder output from all 47 species
Zm00001e023552_P003	Zm00001e023552	component SMG8 of SMG1C protein kinase complex	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000184	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	IEA	Interproscan
BP	GO:0000956	nuclear-transcribed mRNA catabolic process	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006401	RNA catabolic process	None	Extended
BP	GO:0006402	mRNA catabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009892	negative regulation of metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010605	negative regulation of macromolecule metabolic process	None	Extended
BP	GO:0010629	negative regulation of gene expression	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0016071	mRNA metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019439	aromatic compound catabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034655	nucleobase-containing compound catabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044265	cellular macromolecule catabolic process	None	Extended
BP	GO:0044270	cellular nitrogen compound catabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0046700	heterocycle catabolic process	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901361	organic cyclic compound catabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR019354	SMG8/SMG9	1299	1427
IPR019354	SMG8/SMG9	756	925
IPR019354	SMG8/SMG9	266	369

External Links

No external refs found!

Aev_g09311

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation