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  5. Ppi_g11084

Ppi_g11084 (STOP1)


Aliases : STOP1

Description : C2H2-type subclass STOP transcription factor & original description: none


Gene families : OG0002003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002003_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g11084

Target Alias Description ECC score Gene Family Method Actions
AT5G22890 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 OrthoFinder output from all 47 species
Aev_g08694 STOP1 C2H2-type subclass STOP transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aob_g31489 STOP1 C2H2-type subclass STOP transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ceric.06G007700.1 STOP1, Ceric.06G007700 C2H2-type subclass STOP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ceric.06G011000.1 STOP1, Ceric.06G011000 C2H2-type subclass STOP transcription factor & original... 0.05 OrthoFinder output from all 47 species
Dcu_g16795 STOP1 C2H2-type subclass STOP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g18644 STOP1 C2H2-type subclass STOP transcription factor & original... 0.05 OrthoFinder output from all 47 species
GSVIVT01031459001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 OrthoFinder output from all 47 species
GSVIVT01034505001 STOP1 RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 OrthoFinder output from all 47 species
Gb_21302 No alias C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os02g36360.1 STOP1, LOC_Os02g36360 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os03g62230.1 STOP1, LOC_Os03g62230 C2H2 zinc finger transcription factor 0.07 OrthoFinder output from all 47 species
LOC_Os04g08290.1 LOC_Os04g08290 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os08g44830.1 LOC_Os08g44830 C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Msp_g08112 STOP1 C2H2-type subclass STOP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ore_g09947 STOP1 C2H2-type subclass STOP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Smo58353 STOP1 RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 OrthoFinder output from all 47 species
Solyc11g017140.3.1 STOP1, Solyc11g017140 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Spa_g12910 STOP1 C2H2-type subclass STOP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Zm00001e006302_P001 STOP1, Zm00001e006302 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
CC GO:0048046 apoplast IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!