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Aliases : EMB2261
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00029p00062590 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein DOT4,... | 0.02 | OrthoFinder output from all 47 species | |
| AT1G53600 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT2G33680 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT3G49142 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT4G16835 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT5G08490 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT5G09950 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT5G43790 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g003303 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g099276 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g099295 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g37660 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g42385 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ala_g05187 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g13276 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g03858 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g14128 | CRR2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g30309 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g30562 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g30646 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g60846 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g22823 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g28233 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g28416 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene14090.t1 | Aspi01Gene14090 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene34544.t1 | Aspi01Gene34544 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene34733.t1 | Aspi01Gene34733 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0001.g000793 | No alias | not classified & original description: CDS=1-2415 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0006.g010197 | OTP82 | not classified & original description: CDS=163-897 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0028.g023788 | No alias | not classified & original description: CDS=1-3210 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0033.g025112 | No alias | not classified & original description: CDS=1-2496 | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0069.g036581 | No alias | not classified & original description: CDS=1-1653 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0099.g044128 | No alias | not classified & original description: CDS=1-2508 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0583.g078513 | No alias | not classified & original description: CDS=1-2793 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g24774 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g34772 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g44509 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.03G011500.1 | Ceric.03G011500 | not classified & original description: pacid=50571528... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.04G019500.1 | Ceric.04G019500 | not classified & original description: pacid=50631611... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.04G068200.1 | OTP86, Ceric.04G068200 | not classified & original description: pacid=50632337... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.07G000400.1 | Ceric.07G000400 | not classified & original description: pacid=50627195... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.11G015200.1 | Ceric.11G015200 | not classified & original description: pacid=50595684... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.13G028100.1 | Ceric.13G028100 | not classified & original description: pacid=50635194... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.13G050400.1 | Ceric.13G050400 | not classified & original description: pacid=50636404... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.14G006100.1 | Ceric.14G006100 | not classified & original description: pacid=50634395... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.17G054900.1 | DOT4, Ceric.17G054900 | not classified & original description: pacid=50617812... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.19G055600.1 | MEF19, Ceric.19G055600 | not classified & original description: pacid=50576555... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.21G046200.1 | Ceric.21G046200 | not classified & original description: pacid=50604280... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.26G043600.1 | PTAC9, OSB2,... | ssDNA-binding protein *(OSB) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.30G023200.1 | Ceric.30G023200 | not classified & original description: pacid=50609019... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.32G014100.1 | Ceric.32G014100 | not classified & original description: pacid=50597391... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.36G017300.1 | Ceric.36G017300 | not classified & original description: pacid=50568624... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g08183 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g30248 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g17102 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g38580 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g03935 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g16461 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g21984 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g24736 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g28696 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g38179 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g41697 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g12413 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g19916 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g24510 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g66160.1 | REME1, LOC_Os01g66160 | Pentatricopeptide repeat-containing protein At2g03880,... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os04g14130.1 | LOC_Os04g14130 | Pentatricopeptide repeat-containing protein At5g16860... | 0.04 | OrthoFinder output from all 47 species | |
| Len_g03913 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g18326 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g43654 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g54059 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g07681 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_615077g0010 | No alias | Pentatricopeptide repeat-containing protein At3g12770... | 0.02 | OrthoFinder output from all 47 species | |
| Mp8g01790.1 | No alias | ssDNA-binding protein (OSB) | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g09797 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g31404 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g31456 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g35725 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g44934 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g45694 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g06724 | OTP86 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g24075 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g27966 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g30911 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g40890 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g43142 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g08797 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g47021 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g63833 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g64859 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g02794 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g04460 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g23564 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g26686 | REME1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g06278 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g39360 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g52997 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0009.g004386 | No alias | not classified & original description: CDS=1-2367 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0013.g005946 | No alias | not classified & original description: CDS=1-1029 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0017.g007051 | CRR22 | not classified & original description: CDS=50-2191 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0018.g007447 | No alias | not classified & original description: CDS=108-3026 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0024.g009122 | No alias | not classified & original description: CDS=1-1917 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0056.g014554 | No alias | not classified & original description: CDS=1-3528 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0090.g018727 | No alias | not classified & original description: CDS=1-2163 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0095.g019284 | No alias | not classified & original description: CDS=34-390 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0098.g019493 | No alias | not classified & original description: CDS=1-3789 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0215.g026034 | OTP84 | not classified & original description: CDS=2081-4369 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g07050 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g11203 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g11635 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g12347 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo111982 | No alias | Pentatricopeptide repeat-containing protein At5g66520... | 0.03 | OrthoFinder output from all 47 species | |
| Smo77340 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc09g090440.1.1 | LPA66, Solyc09g090440 | Pentatricopeptide repeat-containing protein At5g66520... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g09427 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g25072 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g26453 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g29179 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g44315 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000966 | RNA 5'-end processing | IEP | HCCA |
| BP | GO:0001682 | tRNA 5'-leader removal | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0004175 | endopeptidase activity | IEP | HCCA |
| MF | GO:0004222 | metalloendopeptidase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| CC | GO:0005634 | nucleus | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0008033 | tRNA processing | IEP | HCCA |
| MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
| CC | GO:0030677 | ribonuclease P complex | IEP | HCCA |
| BP | GO:0034470 | ncRNA processing | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| BP | GO:0099116 | tRNA 5'-end processing | IEP | HCCA |
| CC | GO:0140535 | intracellular protein-containing complex | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| CC | GO:1902494 | catalytic complex | IEP | HCCA |
| CC | GO:1902555 | endoribonuclease complex | IEP | HCCA |
| CC | GO:1905348 | endonuclease complex | IEP | HCCA |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 211 | 257 |
| IPR002885 | Pentatricopeptide_repeat | 287 | 310 |
| IPR002885 | Pentatricopeptide_repeat | 413 | 440 |
| IPR002885 | Pentatricopeptide_repeat | 148 | 177 |
| IPR002885 | Pentatricopeptide_repeat | 514 | 540 |
| IPR002885 | Pentatricopeptide_repeat | 486 | 507 |
| IPR002885 | Pentatricopeptide_repeat | 80 | 108 |
| IPR002885 | Pentatricopeptide_repeat | 318 | 337 |
| IPR002885 | Pentatricopeptide_repeat | 185 | 207 |
| IPR002885 | Pentatricopeptide_repeat | 549 | 577 |
| No external refs found! |