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  5. Ppi_g09029

Ppi_g09029


Description : not classified & original description: none


Gene families : OG0000614 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000614_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g09029
Cluster HCCA: Cluster_235

Target Alias Description ECC score Gene Family Method Actions
Ala_g01971 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g02256 No alias regulatory protein *(KHZ) of autonomous floral-promotion... 0.03 OrthoFinder output from all 47 species
Aspi01Gene22926.t2 Aspi01Gene22926 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene52686.t1 Aspi01Gene52686 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g10561 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g33461 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g74371 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.38G012000.1 Ceric.38G012000 not classified & original description: pacid=50579791... 0.03 OrthoFinder output from all 47 species
Dac_g28420 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Ehy_g13206 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01024340001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os08g06330.1 LOC_Os08g06330 C3H zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Lfl_g11668 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Lfl_g40942 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g00930 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Ore_g29816 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g30390 No alias regulatory protein of RNA homeostasis & original... 0.04 OrthoFinder output from all 47 species
Ore_g32193 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g08692 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000115 No alias platform ATPase CDC48 & original description: CDS=3649-4851 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0199.g025558 No alias regulatory protein of RNA homeostasis & original... 0.04 OrthoFinder output from all 47 species
Spa_g49690 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g55076 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g11119 No alias regulatory protein of RNA homeostasis & original... 0.04 OrthoFinder output from all 47 species
Zm00001e025892_P001 Zm00001e025892 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004402 histone acetyltransferase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006473 protein acetylation IEP HCCA
BP GO:0006475 internal protein amino acid acetylation IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016573 histone acetylation IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0018393 internal peptidyl-lysine acetylation IEP HCCA
BP GO:0018394 peptidyl-lysine acetylation IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0034212 peptide N-acetyltransferase activity IEP HCCA
BP GO:0043543 protein acylation IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 267 292
IPR000571 Znf_CCCH 219 241
IPR000571 Znf_CCCH 156 179
No external refs found!