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  5. Ppi_g08641

Ppi_g08641


Description : not classified & original description: none


Gene families : OG0000548 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000548_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g08641

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00200080 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT5G24600 No alias Protein of unknown function, DUF599 0.03 OrthoFinder output from all 47 species
AT5G46060 No alias Protein of unknown function, DUF599 0.03 OrthoFinder output from all 47 species
Aspi01Gene25946.t1 Aspi01Gene25946 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0359.g066863 No alias not classified & original description: CDS=223-915 0.04 OrthoFinder output from all 47 species
Ehy_g11755 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g02713 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g00794 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g31363 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g03962 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g17222 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g39352 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g47407 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g04858 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g19553 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo101278 No alias No description available 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031123 RNA 3'-end processing IEP HCCA
BP GO:0031124 mRNA 3'-end processing IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006747 DUF599 13 230
No external refs found!