Aliases : PUB44, SAUL1, ATPUB44
Description : E3 ubiquitin ligase *(SAUL) & original description: none
Gene families : OG0000782 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000782_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Ppi_g06997 | |
Cluster | HCCA: Cluster_32 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Ala_g11501 | PUB44, SAUL1, ATPUB44 | E3 ubiquitin ligase *(SAUL) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aob_g07414 | PUB44, SAUL1, ATPUB44 | E3 ubiquitin ligase *(SAUL) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Aop_g09311 | PUB44, SAUL1, ATPUB44 | E3 ubiquitin ligase *(SAUL) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene18079.t2 | PUB44, SAUL1,... | E3 ubiquitin ligase *(SAUL) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene54979.t1 | Aspi01Gene54979 | E3 ubiquitin ligase *(SAUL) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ceric.08G057000.1 | Ceric.08G057000 | E3 ubiquitin ligase *(SAUL) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
Dde_g20967 | PUB44, SAUL1, ATPUB44 | E3 ubiquitin ligase *(SAUL) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g01445 | No alias | E3 ubiquitin ligase *(SAUL) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ore_g17308 | PUB44, SAUL1, ATPUB44 | E3 ubiquitin ligase *(SAUL) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pir_g10452 | No alias | E3 ubiquitin ligase *(SAUL) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pir_g16538 | PUB44, SAUL1, ATPUB44 | E3 ubiquitin ligase *(SAUL) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0016.g006961 | PUB44, SAUL1, ATPUB44 | E3 ubiquitin ligase *(SAUL) & original description: CDS=34-3165 | 0.03 | OrthoFinder output from all 47 species | |
Sam_g16186 | No alias | E3 ubiquitin ligase *(SAUL) & original description: none | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004842 | ubiquitin-protein transferase activity | IEA | Interproscan |
BP | GO:0016567 | protein ubiquitination | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004518 | nuclease activity | IEP | HCCA |
MF | GO:0004519 | endonuclease activity | IEP | HCCA |
MF | GO:0004521 | endoribonuclease activity | IEP | HCCA |
MF | GO:0004525 | ribonuclease III activity | IEP | HCCA |
MF | GO:0004527 | exonuclease activity | IEP | HCCA |
MF | GO:0004540 | ribonuclease activity | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006396 | RNA processing | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
MF | GO:0008374 | O-acyltransferase activity | IEP | HCCA |
MF | GO:0008408 | 3'-5' exonuclease activity | IEP | HCCA |
MF | GO:0016747 | acyltransferase activity, transferring groups other than amino-acyl groups | IEP | HCCA |
MF | GO:0016787 | hydrolase activity | IEP | HCCA |
MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | HCCA |
MF | GO:0016891 | endoribonuclease activity, producing 5'-phosphomonoesters | IEP | HCCA |
MF | GO:0016893 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | HCCA |
MF | GO:0032296 | double-stranded RNA-specific ribonuclease activity | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR003613 | Ubox_domain | 260 | 328 |
No external refs found! |