Ppi_g06991 (LUG, RON2)


Aliases : LUG, RON2

Description : component *(LUG/LUH) of transcriptional co-repressor complex & original description: none


Gene families : OG0000790 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000790_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g06991

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00122p00094620 LUG, RON2,... RNA biosynthesis.transcriptional repression.LUG... 0.03 OrthoFinder output from all 47 species
Adi_g011009 LUG, RON2 component *(LUG/LUH) of transcriptional co-repressor... 0.02 OrthoFinder output from all 47 species
Adi_g067892 LUG, RON2 component *(LUG/LUH) of transcriptional co-repressor... 0.03 OrthoFinder output from all 47 species
Als_g29035 LUG, RON2 EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Ceric.35G054400.1 LUG, RON2,... component *(LUG/LUH) of transcriptional co-repressor... 0.03 OrthoFinder output from all 47 species
Ehy_g07081 LUG, RON2 component *(LUG/LUH) of transcriptional co-repressor... 0.02 OrthoFinder output from all 47 species
GSVIVT01015458001 LUG, RON2 RNA biosynthesis.transcriptional repression.LUG... 0.04 OrthoFinder output from all 47 species
GSVIVT01035790001 LUG, RON2 RNA biosynthesis.transcriptional repression.LUG... 0.03 OrthoFinder output from all 47 species
GSVIVT01035791001 LUG, RON2 RNA biosynthesis.transcriptional repression.LUG... 0.07 OrthoFinder output from all 47 species
Gb_10345 LUG, RON2 transcriptional co-repressor (LUG) 0.02 OrthoFinder output from all 47 species
Gb_10347 LUG, RON2 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os03g64300.1 LUH, LOC_Os03g64300 transcriptional co-repressor (LUG) 0.04 OrthoFinder output from all 47 species
Lfl_g07408 LUG, RON2 component *(LUG/LUH) of transcriptional co-repressor... 0.04 OrthoFinder output from all 47 species
Solyc06g065640.3.1 LUG, RON2, Solyc06g065640 transcriptional co-repressor (LUG) 0.03 OrthoFinder output from all 47 species
Zm00001e016200_P001 LUH, Zm00001e016200 transcriptional co-repressor (LUG) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0030515 snoRNA binding IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
MF GO:0034511 U3 snoRNA binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043248 proteasome assembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0060090 molecular adaptor activity IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 664 699
IPR001680 WD40_repeat 788 822
IPR001680 WD40_repeat 626 657
IPR001680 WD40_repeat 707 742
IPR001680 WD40_repeat 876 909
IPR006594 LisH 10 36
No external refs found!