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  5. Ppi_g06188

Ppi_g06188 (PBC1)


Aliases : PBC1

Description : beta-type-3 component *(PBC) of 26S proteasome & original description: none


Gene families : OG0004036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004036_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g06188

Target Alias Description ECC score Gene Family Method Actions
Adi_g039491 PBC1 beta-type-3 component *(PBC) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
Aob_g01174 PBC1 beta-type-3 component *(PBC) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Aop_g00275 PBC1 beta-type-3 component *(PBC) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Aop_g27355 PBC1 beta-type-3 component *(PBC) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene43463.t1 PBC1, Aspi01Gene43463 beta-type-3 component *(PBC) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Azfi_s0008.g011490 PBC1 beta-type-3 component *(PBC) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
Dac_g10913 PBC1 beta-type-3 component *(PBC) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
Dcu_g35364 PBC1 beta-type-3 component *(PBC) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
GSVIVT01008836001 PBC1 Protein degradation.26S proteasome.20S core... 0.03 OrthoFinder output from all 47 species
Len_g24778 PBC2 beta-type-3 component *(PBC) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Lfl_g00669 PBC1 beta-type-3 component *(PBC) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Msp_g01419 PBC1 beta-type-3 component *(PBC) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Pir_g06584 PBC1 beta-type-3 component *(PBC) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Solyc04g009410.3.1 PBC1, Solyc04g009410 component beta type-3 of 26S proteasome 0.02 OrthoFinder output from all 47 species
Zm00001e037487_P001 PBC1, Zm00001e037487 component beta type-3 of 26S proteasome 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0051603 proteolysis involved in protein catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
MF GO:0004560 alpha-L-fucosidase activity IEP HCCA
MF GO:0004664 prephenate dehydratase activity IEP HCCA
MF GO:0005048 signal sequence binding IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
CC GO:0005750 mitochondrial respiratory chain complex III IEP HCCA
CC GO:0005787 signal peptidase complex IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006558 L-phenylalanine metabolic process IEP HCCA
BP GO:0006621 protein retention in ER lumen IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0008064 regulation of actin polymerization or depolymerization IEP HCCA
CC GO:0008290 F-actin capping protein complex IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009060 aerobic respiration IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
BP GO:0009094 L-phenylalanine biosynthetic process IEP HCCA
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010639 negative regulation of organelle organization IEP HCCA
MF GO:0015928 fucosidase activity IEP HCCA
BP GO:0015980 energy derivation by oxidation of organic compounds IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019646 aerobic electron transport chain IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
BP GO:0022904 respiratory electron transport chain IEP HCCA
BP GO:0030832 regulation of actin filament length IEP HCCA
BP GO:0030833 regulation of actin filament polymerization IEP HCCA
BP GO:0030834 regulation of actin filament depolymerization IEP HCCA
BP GO:0030835 negative regulation of actin filament depolymerization IEP HCCA
BP GO:0030837 negative regulation of actin filament polymerization IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
BP GO:0031333 negative regulation of protein-containing complex assembly IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
BP GO:0032271 regulation of protein polymerization IEP HCCA
BP GO:0032272 negative regulation of protein polymerization IEP HCCA
BP GO:0032507 maintenance of protein location in cell IEP HCCA
BP GO:0032535 regulation of cellular component size IEP HCCA
BP GO:0032956 regulation of actin cytoskeleton organization IEP HCCA
BP GO:0032970 regulation of actin filament-based process IEP HCCA
BP GO:0033043 regulation of organelle organization IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
MF GO:0033218 amide binding IEP HCCA
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP HCCA
MF GO:0042277 peptide binding IEP HCCA
BP GO:0043242 negative regulation of protein-containing complex disassembly IEP HCCA
BP GO:0043244 regulation of protein-containing complex disassembly IEP HCCA
BP GO:0043254 regulation of protein-containing complex assembly IEP HCCA
BP GO:0044087 regulation of cellular component biogenesis IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0045185 maintenance of protein location IEP HCCA
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
CC GO:0045275 respiratory chain complex III IEP HCCA
BP GO:0045333 cellular respiration IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0046923 ER retention sequence binding IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0051016 barbed-end actin filament capping IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051129 negative regulation of cellular component organization IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051235 maintenance of location IEP HCCA
BP GO:0051493 regulation of cytoskeleton organization IEP HCCA
BP GO:0051494 negative regulation of cytoskeleton organization IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0051651 maintenance of location in cell IEP HCCA
BP GO:0051693 actin filament capping IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
CC GO:0070069 cytochrome complex IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0072595 maintenance of protein localization in organelle IEP HCCA
BP GO:0090066 regulation of anatomical structure size IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
CC GO:0098803 respiratory chain complex IEP HCCA
BP GO:0110053 regulation of actin filament organization IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
BP GO:1901879 regulation of protein depolymerization IEP HCCA
BP GO:1901880 negative regulation of protein depolymerization IEP HCCA
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP HCCA
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP HCCA
CC GO:1902495 transmembrane transporter complex IEP HCCA
BP GO:1902903 regulation of supramolecular fiber organization IEP HCCA
BP GO:1902904 negative regulation of supramolecular fiber organization IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
CC GO:1990351 transporter complex IEP HCCA
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 7 188
No external refs found!