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  5. Ppi_g06076

Ppi_g06076 (STV1, RPL24, RPL24B)


Aliases : STV1, RPL24, RPL24B

Description : component *(eL24) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0002539 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002539_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g06076
Cluster HCCA: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00069p00095150 RPL24A,... Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 OrthoFinder output from all 47 species
AMTR_s00119p00055300 RPL24A,... Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 OrthoFinder output from all 47 species
AT2G36620 RPL24A ribosomal protein L24 0.03 OrthoFinder output from all 47 species
AT3G53020 STV1, RPL24, RPL24B Ribosomal protein L24e family protein 0.04 OrthoFinder output from all 47 species
Ala_g20428 RPL24A component *(eL24) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ala_g22691 RPL24A component *(eL24) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Aop_g07149 RPL24A component *(eL24) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Aop_g22551 STV1, RPL24, RPL24B component *(eL24) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Azfi_s0081.g038645 RPL24A component *(eL24) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ceric.24G022200.1 RPL24A, Ceric.24G022200 component *(eL24) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
Ceric.27G010000.1 STV1, RPL24,... component *(eL24) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001093.9 STV1, RPL24, RPL24B No description available 0.09 OrthoFinder output from all 47 species
Cre09.g391097 STV1, RPL24, RPL24B Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 OrthoFinder output from all 47 species
Dac_g29270 STV1, RPL24, RPL24B component *(eL24) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Dcu_g45784 RPL24A component *(eL24) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
LOC_Os01g59990.1 STV1, RPL24,... pri-miRNA recruitment factor (STV1). component RPL24 of... 0.03 OrthoFinder output from all 47 species
Mp5g17510.1 RPL24A pri-miRNA recruitment factor (STV1). component RPL24 of... 0.05 OrthoFinder output from all 47 species
Pp3c13_10770V3.1 RPL24A, Pp3c13_10770 ribosomal protein L24 0.03 OrthoFinder output from all 47 species
Pp3c3_8930V3.1 RPL24A, Pp3c3_8930 Ribosomal protein L24e family protein 0.02 OrthoFinder output from all 47 species
Pp3c4_25160V3.1 RPL24A, Pp3c4_25160 ribosomal protein L24 0.02 OrthoFinder output from all 47 species
Sam_g06964 No alias component *(eL24) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Solyc09g008800.3.1 STV1, RPL24,... pri-miRNA recruitment factor (STV1). component RPL24 of... 0.03 OrthoFinder output from all 47 species
Solyc10g085480.2.1 RPL24A, Solyc10g085480 pri-miRNA recruitment factor (STV1). component RPL24 of... 0.03 OrthoFinder output from all 47 species
Spa_g03066 RPL24A component *(eL24) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Spa_g08054 RPL24A component *(eL24) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Spa_g31362 RPL24A component *(eL24) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Tin_g23099 STV1, RPL24, RPL24B component *(eL24) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004332 fructose-bisphosphate aldolase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR000988 Ribosomal_L24e-rel 4 67
No external refs found!