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  5. Ppi_g05593

Ppi_g05593 (ATVAMP711, VAMP711)


Aliases : ATVAMP711, VAMP711

Description : R-type VAMP7-group component of SNARE longin membrane fusion complex & original description: none


Gene families : OG0002036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002036_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g05593

Target Alias Description ECC score Gene Family Method Actions
Aev_g05707 ATVAMP711, VAMP711 R-type VAMP7-group component of SNARE longin membrane... 0.02 OrthoFinder output from all 47 species
Aob_g29262 VAMP714, ATVAMP714 R-type VAMP7-group component of SNARE longin membrane... 0.03 OrthoFinder output from all 47 species
Cba_g10299 ATVAMP711, VAMP711 R-type VAMP7-group component of SNARE longin membrane... 0.03 OrthoFinder output from all 47 species
Cba_g24448 VAMP714, ATVAMP714 R-type VAMP7-group component of SNARE longin membrane... 0.02 OrthoFinder output from all 47 species
Ceric.26G053800.1 ATVAMP711,... R-type VAMP7-group component of SNARE longin membrane... 0.06 OrthoFinder output from all 47 species
Nbi_g04622 ATVAMP712, VAMP712 R-type VAMP7-group component of SNARE longin membrane... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0012.g005609 ATVAMP711, VAMP711 R-type VAMP7-group component of SNARE longin membrane... 0.03 OrthoFinder output from all 47 species
Sam_g08656 No alias R-type VAMP7-group component of SNARE longin membrane... 0.03 OrthoFinder output from all 47 species
Sam_g52392 No alias R-type VAMP7-group component of SNARE longin membrane... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000976 transcription cis-regulatory region binding IEP HCCA
MF GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding IEP HCCA
MF GO:0001067 transcription regulatory region nucleic acid binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0015031 protein transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0032422 purine-rich negative regulatory element binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1990837 sequence-specific double-stranded DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR010908 Longin_dom 29 108
IPR042855 V_SNARE_CC 124 211
No external refs found!