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  5. Ppi_g04950

Ppi_g04950


Description : subunit zeta of cargo adaptor F-subcomplex & original description: none


Gene families : OG0003673 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003673_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g04950
Cluster HCCA: Cluster_145

Target Alias Description ECC score Gene Family Method Actions
AT4G08520 No alias SNARE-like superfamily protein 0.04 OrthoFinder output from all 47 species
Aev_g27418 No alias subunit zeta of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
Ala_g00413 No alias subunit zeta of cargo adaptor F-subcomplex & original... 0.04 OrthoFinder output from all 47 species
Als_g02767 No alias subunit zeta of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
Als_g31273 No alias subunit zeta of cargo adaptor F-subcomplex & original... 0.07 OrthoFinder output from all 47 species
Aop_g01931 No alias subunit zeta of cargo adaptor F-subcomplex & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0007.g010675 No alias subunit zeta of cargo adaptor F-subcomplex & original... 0.02 OrthoFinder output from all 47 species
Cba_g02394 No alias subunit zeta of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020848.67 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 OrthoFinder output from all 47 species
Cre08.g371450 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.07 OrthoFinder output from all 47 species
Dcu_g14889 No alias subunit zeta of cargo adaptor F-subcomplex & original... 0.02 OrthoFinder output from all 47 species
Ehy_g07340 No alias subunit zeta of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01016804001 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 OrthoFinder output from all 47 species
LOC_Os02g21250.1 LOC_Os02g21250 subunit zeta of cargo adaptor F-subcomplex 0.04 OrthoFinder output from all 47 species
LOC_Os05g38610.1 LOC_Os05g38610 subunit zeta of cargo adaptor F-subcomplex 0.04 OrthoFinder output from all 47 species
Lfl_g30792 No alias subunit zeta of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
Ore_g37512 No alias subunit zeta of cargo adaptor F-subcomplex & original... 0.02 OrthoFinder output from all 47 species
Solyc12g044910.2.1 Solyc12g044910 subunit zeta of cargo adaptor F-subcomplex 0.02 OrthoFinder output from all 47 species
Spa_g14691 No alias subunit zeta of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
Spa_g14692 No alias subunit zeta of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
Tin_g06378 No alias subunit zeta of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
Zm00001e031835_P001 Zm00001e031835 subunit zeta of cargo adaptor F-subcomplex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
BP GO:0007155 cell adhesion IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR022775 AP_mu_sigma_su 44 186
No external refs found!