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  5. Ppi_g04809

Ppi_g04809 (PSBX)


Aliases : PSBX

Description : component *(PsbX) of PS-II complex & original description: none


Gene families : OG0002177 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002177_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g04809

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00218080 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.07 OrthoFinder output from all 47 species
AT2G06520 PSBX photosystem II subunit X 0.05 OrthoFinder output from all 47 species
Adi_g021165 PSBX component *(PsbX) of PS-II complex & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g024522 PSBX component *(PsbX) of PS-II complex & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g024523 PSBX component *(PsbX) of PS-II complex & original description: none 0.07 OrthoFinder output from all 47 species
Adi_g048424 PSBX component *(PsbX) of PS-II complex & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g41627 PSBX component *(PsbX) of PS-II complex & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g45505 PSBX component *(PsbX) of PS-II complex & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g10239 PSBX component *(PsbX) of PS-II complex & original description: none 0.09 OrthoFinder output from all 47 species
Ala_g27184 PSBX component *(PsbX) of PS-II complex & original description: none 0.09 OrthoFinder output from all 47 species
Als_g28828 PSBX component *(PsbX) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55991 PSBX component *(PsbX) of PS-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g15623 PSBX component *(PsbX) of PS-II complex & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene08999.t1 PSBX, Aspi01Gene08999 component *(PsbX) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene58924.t1 PSBX, Aspi01Gene58924 component *(PsbX) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene59149.t1 PSBX, Aspi01Gene59149 component *(PsbX) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0027.g023498 PSBX component *(PsbX) of PS-II complex & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0245.g060001 No alias component *(PsbX) of PS-II complex & original... 0.04 OrthoFinder output from all 47 species
Cba_g05544 PSBX component *(PsbX) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g22045 PSBX component *(PsbX) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.04G082200.1 PSBX, Ceric.04G082200 component *(PsbX) of PS-II complex & original... 0.07 OrthoFinder output from all 47 species
Ceric.24G060900.1 PSBX, Ceric.24G060900 component *(PsbX) of PS-II complex & original... 0.06 OrthoFinder output from all 47 species
Dac_g02996 PSBX component *(PsbX) of PS-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g14007 PSBX component *(PsbX) of PS-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g17182 PSBX component *(PsbX) of PS-II complex & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g21257 PSBX component *(PsbX) of PS-II complex & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g31006 PSBX component *(PsbX) of PS-II complex & original description: none 0.07 OrthoFinder output from all 47 species
Dde_g21199 PSBX component *(PsbX) of PS-II complex & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g22238 PSBX component *(PsbX) of PS-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g23441 PSBX component *(PsbX) of PS-II complex & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01035449001 PSBX Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.07 OrthoFinder output from all 47 species
Gb_07296 PSBX component PsbX of PS-II complex 0.03 OrthoFinder output from all 47 species
Gb_14525 PSBX component PsbX of PS-II complex 0.03 OrthoFinder output from all 47 species
LOC_Os03g22370.1 PSBX, LOC_Os03g22370 component PsbX of PS-II complex 0.07 OrthoFinder output from all 47 species
LOC_Os07g47640.1 PSBX, LOC_Os07g47640 component PsbX of PS-II complex 0.06 OrthoFinder output from all 47 species
Len_g13373 PSBX component *(PsbX) of PS-II complex & original description: none 0.05 OrthoFinder output from all 47 species
Len_g19235 No alias component *(PsbX) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g10431 PSBX component *(PsbX) of PS-II complex & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g15877 No alias component *(PsbX) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
MA_464043g0010 PSBX component PsbX of PS-II complex 0.05 OrthoFinder output from all 47 species
Mp6g21460.1 PSBX component PsbX of PS-II complex 0.04 OrthoFinder output from all 47 species
Ore_g25684 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g09968 PSBX component *(PsbX) of PS-II complex & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g48365 PSBX component *(PsbX) of PS-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g06188 PSBX component *(PsbX) of PS-II complex & original description: none 0.06 OrthoFinder output from all 47 species
Pp3c5_17290V3.1 PSBX, Pp3c5_17290 photosystem II subunit X 0.01 OrthoFinder output from all 47 species
Ppi_g24668 No alias component *(PsbX) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002436 PSBX component *(PsbX) of PS-II complex & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0155.g023606 PSBX component *(PsbX) of PS-II complex & original... 0.05 OrthoFinder output from all 47 species
Sam_g04554 No alias component *(PsbX) of PS-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Solyc05g025600.1.1 PSBX, Solyc05g025600 component PsbX of PS-II complex 0.08 OrthoFinder output from all 47 species
Solyc12g150101.1.1 PSBX, Solyc12g150101 component PsbX of PS-II complex 0.04 OrthoFinder output from all 47 species
Spa_g02683 PSBX component *(PsbX) of PS-II complex & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g29201 PSBX component *(PsbX) of PS-II complex & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g35692 PSBX component *(PsbX) of PS-II complex & original description: none 0.09 OrthoFinder output from all 47 species
Tin_g07238 PSBX component *(PsbX) of PS-II complex & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g16593 PSBX component *(PsbX) of PS-II complex & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e025856_P001 PSBX, Zm00001e025856 component PsbX of PS-II complex 0.07 OrthoFinder output from all 47 species
Zm00001e035834_P001 PSBX, Zm00001e035834 component PsbX of PS-II complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0009523 photosystem II IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006450 regulation of translational fidelity IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009536 plastid IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
CC GO:0030532 small nuclear ribonucleoprotein complex IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0097525 spliceosomal snRNP complex IEP HCCA
CC GO:0097526 spliceosomal tri-snRNP complex IEP HCCA
CC GO:0120114 Sm-like protein family complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR009518 PSII_PsbX 91 128
No external refs found!