1. Home
  2. Species
  3. Pyrrosia piloselloides
  4. Sequence
  5. Ppi_g03731

Ppi_g03731 (ATNTH1)


Aliases : ATNTH1

Description : bifunctional glycosylase-lyase and endonuclease *(NTH) & original description: none


Gene families : OG0003391 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003391_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g03731
Cluster HCCA: Cluster_240

Target Alias Description ECC score Gene Family Method Actions
Adi_g076198 ATNTH1 bifunctional glycosylase-lyase and endonuclease *(NTH) &... 0.03 OrthoFinder output from all 47 species
Aob_g18317 ATNTH1 bifunctional glycosylase-lyase and endonuclease *(NTH) &... 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g010504 ATNTH1 bifunctional glycosylase-lyase and endonuclease *(NTH) &... 0.03 OrthoFinder output from all 47 species
Lfl_g01410 ATNTH2, NTH2 bifunctional glycosylase-lyase and endonuclease *(NTH) &... 0.03 OrthoFinder output from all 47 species
Spa_g04151 ATNTH1 bifunctional glycosylase-lyase and endonuclease *(NTH) &... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0051539 4 iron, 4 sulfur cluster binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
InterPro domains Description Start Stop
IPR003265 HhH-GPD_domain 137 269
IPR000445 HhH_motif 203 231
IPR003651 Endonuclease3_FeS-loop_motif 303 319
No external refs found!