Aliases : AMT1;2, ATAMT1;2
Description : ammonium transporter *(AMT1) & original description: none
Gene families : OG0001233 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001233_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Ppi_g03031 | |
Cluster | HCCA: Cluster_289 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00050p00217780 | evm_27.TU.AmTr_v1... | Ammonium transporter 1 member 1 OS=Oryza sativa subsp. japonica | 0.02 | OrthoFinder output from all 47 species | |
AT3G24290 | AMT1;5 | ammonium transporter 1;5 | 0.03 | OrthoFinder output from all 47 species | |
AT3G24300 | AMT1;3, ATAMT1;3 | ammonium transporter 1;3 | 0.03 | OrthoFinder output from all 47 species | |
AT4G13510 | ATAMT1, AMT1;1, ATAMT1;1 | ammonium transporter 1;1 | 0.04 | OrthoFinder output from all 47 species | |
Dcu_g03739 | AMT1;2, ATAMT1;2 | ammonium transporter *(AMT1) & original description: none | 0.08 | OrthoFinder output from all 47 species | |
GSVIVT01001853001 | ATAMT1, AMT1;1, ATAMT1;1 | Ammonium transporter 1 member 1 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os02g40710.1 | ATAMT1, AMT1;1,... | ammonium transporter (AMT1) | 0.04 | OrthoFinder output from all 47 species | |
MA_369429g0010 | AMT1;2, ATAMT1;2 | ammonium transporter (AMT1) | 0.04 | OrthoFinder output from all 47 species | |
Mp6g08310.1 | AMT1;3, ATAMT1;3 | ammonium transporter (AMT1) | 0.02 | OrthoFinder output from all 47 species | |
Mp8g05310.1 | AMT1;3, ATAMT1;3 | ammonium transporter (AMT1) | 0.03 | OrthoFinder output from all 47 species | |
Pir_g41331 | ATAMT1, AMT1;1, ATAMT1;1 | ammonium transporter *(AMT1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Smo163770 | AMT1;3, ATAMT1;3 | Solute transport.channels.AMT family.ammonium... | 0.06 | OrthoFinder output from all 47 species | |
Solyc04g050440.3.1 | AMT1;2,... | ammonium transporter (AMT1) | 0.04 | OrthoFinder output from all 47 species | |
Tin_g07045 | ATAMT1, AMT1;1, ATAMT1;1 | ammonium transporter *(AMT1) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e041215_P001 | ATAMT1, AMT1;1,... | ammonium transporter (AMT1) | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0008519 | ammonium transmembrane transporter activity | IEA | Interproscan |
CC | GO:0016020 | membrane | IEA | Interproscan |
BP | GO:0072488 | ammonium transmembrane transport | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003677 | DNA binding | IEP | HCCA |
MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
CC | GO:0005615 | extracellular space | IEP | HCCA |
BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
BP | GO:0006812 | monoatomic cation transport | IEP | HCCA |
BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
BP | GO:0030001 | metal ion transport | IEP | HCCA |
BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
MF | GO:0043565 | sequence-specific DNA binding | IEP | HCCA |
MF | GO:0046873 | metal ion transmembrane transporter activity | IEP | HCCA |
BP | GO:0050789 | regulation of biological process | IEP | HCCA |
BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
BP | GO:0065007 | biological regulation | IEP | HCCA |
BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR024041 | NH4_transpt_AmtB-like_dom | 49 | 474 |
No external refs found! |