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  5. Ppi_g02820

Ppi_g02820 (NPQ4, PSBS)


Aliases : NPQ4, PSBS

Description : not classified & original description: none


Gene families : OG0002938 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002938_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g02820
Cluster HCCA: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
AT1G44575 NPQ4, PSBS Chlorophyll A-B binding family protein 0.03 OrthoFinder output from all 47 species
Als_g55405 NPQ4, PSBS not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g15210 NPQ4, PSBS not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g15673 NPQ4, PSBS not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g21918 NPQ4, PSBS not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g15847 NPQ4, PSBS not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g19930 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.03 OrthoFinder output from all 47 species
Pnu_g32714 NPQ4, PSBS not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g16538 NPQ4, PSBS not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g17059 NPQ4, PSBS not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g25149 NPQ4, PSBS not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g17275 NPQ4, PSBS non-photochemical quenching PsbS protein & original... 0.02 OrthoFinder output from all 47 species
Zm00001e019137_P001 NPQ4, PSBS,... non-photochemical quenching PsbS protein 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004332 fructose-bisphosphate aldolase activity IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 171 248
No external refs found!