Ppi_g02158

Description : organellar phenylalanine-tRNA ligase & original description: none

Gene families : OG0004257 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004257_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ppi_g02158
Cluster	HCCA: Cluster_213

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00163p00072710	evm_27.TU.AmTr_v1...	Protein biosynthesis.aminoacyl-tRNA synthetase...	0.02	OrthoFinder output from all 47 species
Ala_g10771	No alias	organellar phenylalanine-tRNA ligase & original description: none	0.08	OrthoFinder output from all 47 species
Als_g48930	No alias	organellar phenylalanine-tRNA ligase & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g01694	No alias	organellar phenylalanine-tRNA ligase & original description: none	0.09	OrthoFinder output from all 47 species
Aspi01Gene25853.t1	Aspi01Gene25853	organellar phenylalanine-tRNA ligase & original description: none	0.06	OrthoFinder output from all 47 species
Azfi_s0191.g056973	No alias	organellar phenylalanine-tRNA ligase & original...	0.03	OrthoFinder output from all 47 species
Ceric.07G024500.1	Ceric.07G024500	organellar phenylalanine-tRNA ligase & original...	0.05	OrthoFinder output from all 47 species
Cre02.g079600	No alias	Protein biosynthesis.aminoacyl-tRNA synthetase...	0.06	OrthoFinder output from all 47 species
Dac_g07152	No alias	organellar phenylalanine-tRNA ligase & original description: none	0.09	OrthoFinder output from all 47 species
Dac_g29068	No alias	organellar phenylalanine-tRNA ligase & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g02422	No alias	organellar phenylalanine-tRNA ligase & original description: none	0.1	OrthoFinder output from all 47 species
GSVIVT01010923001	No alias	Protein biosynthesis.aminoacyl-tRNA synthetase...	0.04	OrthoFinder output from all 47 species
Gb_17164	No alias	phenylalanine-tRNA ligase	0.03	OrthoFinder output from all 47 species
Len_g02295	No alias	organellar phenylalanine-tRNA ligase & original description: none	0.04	OrthoFinder output from all 47 species
Lfl_g08346	No alias	organellar phenylalanine-tRNA ligase & original description: none	0.06	OrthoFinder output from all 47 species
MA_12107g0010	No alias	phenylalanine-tRNA ligase	0.02	OrthoFinder output from all 47 species
Mp2g23280.1	No alias	phenylalanine-tRNA ligase	0.07	OrthoFinder output from all 47 species
Msp_g01117	No alias	organellar phenylalanine-tRNA ligase & original description: none	0.04	OrthoFinder output from all 47 species
Nbi_g10100	No alias	organellar phenylalanine-tRNA ligase & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g16357	No alias	organellar phenylalanine-tRNA ligase & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g44045	No alias	organellar phenylalanine-tRNA ligase & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g56886	No alias	organellar phenylalanine-tRNA ligase & original description: none	0.04	OrthoFinder output from all 47 species
Pnu_g09268	No alias	organellar phenylalanine-tRNA ligase & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0101.g019810	No alias	organellar phenylalanine-tRNA ligase & original...	0.03	OrthoFinder output from all 47 species
Spa_g14884	No alias	organellar phenylalanine-tRNA ligase & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g56314	No alias	organellar phenylalanine-tRNA ligase & original description: none	0.05	OrthoFinder output from all 47 species
Zm00001e019889_P001	Zm00001e019889	phenylalanine-tRNA ligase	0.04	OrthoFinder output from all 47 species
Zm00001e029091_P001	Zm00001e029091	phenylalanine-tRNA ligase	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000049	tRNA binding	IEA	Interproscan
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006399	tRNA metabolic process	None	Extended
BP	GO:0006520	amino acid metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
MF	GO:0016874	ligase activity	None	Extended
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0043038	amino acid activation	None	Extended
BP	GO:0043039	tRNA aminoacylation	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:0140101	catalytic activity, acting on a tRNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006413	translational initiation	IEP	HCCA
BP	GO:0006801	superoxide metabolic process	IEP	HCCA
CC	GO:0009521	photosystem	IEP	HCCA
CC	GO:0009523	photosystem II	IEP	HCCA
CC	GO:0009654	photosystem II oxygen evolving complex	IEP	HCCA
BP	GO:0015979	photosynthesis	IEP	HCCA
CC	GO:0019898	extrinsic component of membrane	IEP	HCCA
MF	GO:0051287	NAD binding	IEP	HCCA
BP	GO:0072593	reactive oxygen species metabolic process	IEP	HCCA
CC	GO:1990204	oxidoreductase complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR005121	Fdx_antiC-bd	345	435
IPR002319	Phenylalanyl-tRNA_Synthase	101	332

External Links

No external refs found!

Ppi_g02158

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation