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  5. Ppi_g01188

Ppi_g01188


Description : not classified & original description: none


Gene families : OG0001722 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001722_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g01188

Target Alias Description ECC score Gene Family Method Actions
AT3G02450 No alias cell division protein ftsH, putative 0.02 OrthoFinder output from all 47 species
Aob_g10132 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021127.121 FTSH5, VAR1 ATP-dependent zinc metalloprotease FTSH 5, chloroplastic... 0.01 OrthoFinder output from all 47 species
Dde_g23743 FTSH8 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.03 OrthoFinder output from all 47 species
Lfl_g04989 FTSH8 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.02 OrthoFinder output from all 47 species
Nbi_g11426 FTSH8 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.02 OrthoFinder output from all 47 species
Ore_g04179 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g12324 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0022.g008575 FTSH8 not classified & original description: CDS=1-1161 0.03 OrthoFinder output from all 47 species
Solyc07g055320.4.1 VAR2, FTSH2,... component FtsH1|2|5|6|8 of FtsH plastidial protease complexes 0.03 OrthoFinder output from all 47 species
Tin_g04117 FTSH8 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.03 OrthoFinder output from all 47 species
Zm00001e007868_P001 Zm00001e007868 component FtsHi of protein translocation ATPase motor complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 452 580
IPR041569 AAA_lid_3 612 650
No external refs found!