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  5. Ppi_g00885

Ppi_g00885 (RAP2.2)


Aliases : RAP2.2

Description : transcription factor component *(HRE/RAP2.12) of oxygen-sensor activity & original description: none


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g00885

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00148470 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
AMTR_s00095p00094910 HRD,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
AT1G28370 ATERF11, ERF11 ERF domain protein 11 0.02 OrthoFinder output from all 47 species
AT1G74930 ORA47 Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G15210 ATERF4, RAP2.5,... ethylene responsive element binding factor 4 0.03 OrthoFinder output from all 47 species
AT3G16770 ERF72, EBP, ATEBP, RAP2.3 ethylene-responsive element binding protein 0.02 OrthoFinder output from all 47 species
AT4G17500 ERF-1, ATERF-1 ethylene responsive element binding factor 1 0.02 OrthoFinder output from all 47 species
AT5G07580 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G18450 No alias Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G18560 PUCHI Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G21960 No alias Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G61600 ERF104 ethylene response factor 104 0.04 OrthoFinder output from all 47 species
AT5G67190 DEAR2 DREB and EAR motif protein 2 0.02 OrthoFinder output from all 47 species
Adi_g008628 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF19/20) &... 0.02 OrthoFinder output from all 47 species
Adi_g056044 ERF110 subgroup ERF-X transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g03086 ATERF8, ATERF-8, ERF8 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aob_g07731 ATERF4, RAP2.5,... subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene03290.t1 Aspi01Gene03290 subgroup ERF-I transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene23221.t1 Aspi01Gene23221 subgroup ERF-I transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene44272.t1 ERF7, ATERF7,... subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.02G058000.1 ERF7, ATERF7,... not classified & original description: pacid=50585662... 0.02 OrthoFinder output from all 47 species
Cre16.g649433 RAP2.2 No description available 0.02 OrthoFinder output from all 47 species
Dac_g06915 ATERF12, ERF12 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g07566 DEAR1, CEJ1, ATERF#011 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g09321 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.04 OrthoFinder output from all 47 species
Dac_g39353 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dcu_g17920 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g12401 ERF110 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16366 DREB26 subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g28886 DEAR3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g29593 TINY2 subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01011465001 RAP2.11 External stimuli response.biotic... 0.02 OrthoFinder output from all 47 species
GSVIVT01013935001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
LOC_Os01g21120.1 HRE2, LOC_Os01g21120 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
LOC_Os02g10760.1 WIN1, SHN1,... transcription factor (ERF). SHN-type cutin and suberin... 0.02 OrthoFinder output from all 47 species
LOC_Os02g34270.1 ERF110, LOC_Os02g34270 Ethylene-responsive transcription factor ERF114... 0.03 OrthoFinder output from all 47 species
LOC_Os02g52670.1 ERF110, LOC_Os02g52670 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os03g08500.2 RAP2.2, LOC_Os03g08500 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os04g52090.1 ATERF-9, ERF9,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
LOC_Os04g57340.1 ATERF3, ERF3,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
LOC_Os05g36100.1 ERF110, LOC_Os05g36100 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Len_g35061 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Len_g46730 ATERF-9, ERF9, ATERF9 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g01837 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.02 OrthoFinder output from all 47 species
Lfl_g16644 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.02 OrthoFinder output from all 47 species
Lfl_g38154 Rap2.6L not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10082062g0010 No alias transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
MA_137148g0010 ATERF4, RAP2.5,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
MA_15496g0010 ERF-1, ATERF-1 Ethylene-responsive transcription factor 1A... 0.02 OrthoFinder output from all 47 species
MA_18454g0020 ATERF3, ERF3 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
MA_26547g0010 CRF3 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
MA_502153g0010 ATERF-9, ERF9, ATERF9 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
MA_6305g0010 No alias transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
MA_8384767g0010 No alias transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
MA_959784g0010 No alias transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Mp1g20040.1 ATERF4, RAP2.5,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Msp_g07523 ATERF4, RAP2.5,... subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Msp_g14138 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g01210 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Nbi_g14223 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.04 OrthoFinder output from all 47 species
Nbi_g21132 ORA47 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g36884 No alias subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ore_g15421 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ore_g23421 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g26878 RAP2.11 transcription factor *(ERN1) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g26909 RAP2.11 transcription factor *(ERN1) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g30771 RAP2.11 transcription factor *(ERN1) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g44017 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pir_g05239 ERF72, EBP, ATEBP, RAP2.3 transcription factor component *(HRE/RAP2.12) of... 0.04 OrthoFinder output from all 47 species
Pir_g51434 CBF4, DREB1D transcription factor *(CBF/DREB1) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g65439 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pnu_g02380 ATERF-9, ERF9, ATERF9 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ppi_g63803 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g21922 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g33704 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g38891 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g44662 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g005630.3.1 RAP2.11, Solyc01g005630 transcription factor (ERF). transcription factor (ERN1) 0.02 OrthoFinder output from all 47 species
Solyc01g065980.4.1 ERF72, EBP,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc02g093130.3.1 DEAR3, Solyc02g093130 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Solyc03g026280.3.1 DREB1A, ATCBF3,... transcription factor (DREB). transcription factor (CBF/DREB1) 0.03 OrthoFinder output from all 47 species
Solyc03g093550.1.1 Solyc03g093550 transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
Solyc03g114440.1.1 RAP2.11, Solyc03g114440 transcription factor (ERF). transcription factor (ERN1) 0.02 OrthoFinder output from all 47 species
Solyc03g124110.2.1 DREB1A, ATCBF3,... transcription factor (DREB). transcription factor (CBF/DREB1) 0.02 OrthoFinder output from all 47 species
Solyc05g052040.1.1 Solyc05g052040 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc06g035700.1.1 Solyc06g035700 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Solyc07g053740.1.1 ATERF4, RAP2.5,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Solyc08g078190.2.1 ERF5, ATERF-5,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc09g089930.3.1 ERF1, ATERF1,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Solyc10g006130.1.1 ATERF3, ERF3,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc10g009110.1.1 ATERF4, RAP2.5,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Solyc11g006050.1.1 ERF1, ATERF1,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Spa_g05271 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g52172 TINY2 subgroup ERF-III transcription factor & original... 0.04 OrthoFinder output from all 47 species
Tin_g08460 No alias subgroup ERF-III transcription factor & original... 0.04 OrthoFinder output from all 47 species
Tin_g30387 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.04 OrthoFinder output from all 47 species
Zm00001e002151_P001 HRD, Zm00001e002151 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Zm00001e013685_P001 ATERF4, RAP2.5,... no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e014413_P001 Zm00001e014413 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Zm00001e015327_P001 Zm00001e015327 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Zm00001e019026_P001 CRF3, Zm00001e019026 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e021579_P001 ERF7, ATERF7,... Pathogenesis-related genes transcriptional activator... 0.02 OrthoFinder output from all 47 species
Zm00001e026989_P001 ERF110, Zm00001e026989 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Zm00001e027351_P001 ATERF4, RAP2.5,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e032033_P001 ATERF-9, ERF9,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e041288_P001 Zm00001e041288 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 114 162
No external refs found!