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  5. Ppi_g00675

Ppi_g00675


Description : not classified & original description: none


Gene families : OG0004685 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004685_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g00675
Cluster HCCA: Cluster_213

Target Alias Description ECC score Gene Family Method Actions
Aev_g07705 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene04863.t1 Aspi01Gene04863 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g00703 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.08G048700.1 Ceric.08G048700 not classified & original description: pacid=50638039... 0.04 OrthoFinder output from all 47 species
Dac_g14089 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g03552 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01011796001 No alias Fruit protein pKIWI502 OS=Actinidia deliciosa 0.03 OrthoFinder output from all 47 species
Gb_38340 No alias Fruit protein pKIWI502 OS=Actinidia deliciosa... 0.02 OrthoFinder output from all 47 species
LOC_Os02g22260.1 LOC_Os02g22260 Fruit protein pKIWI502 OS=Actinidia deliciosa... 0.11 OrthoFinder output from all 47 species
Len_g13427 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g00470 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp3g16410.1 No alias Fruit protein pKIWI502 OS=Actinidia deliciosa... 0.06 OrthoFinder output from all 47 species
Msp_g01015 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g06561 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g32306 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pp3c16_22650V3.1 Pp3c16_22650 FAD/NAD(P)-binding oxidoreductase 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0010.g004783 No alias not classified & original description: CDS=141-1025 0.09 OrthoFinder output from all 47 species
Smo443172 No alias Fruit protein pKIWI502 OS=Actinidia deliciosa 0.06 OrthoFinder output from all 47 species
Solyc05g008450.3.1 Solyc05g008450 Fruit protein pKIWI502 OS=Actinidia deliciosa... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001433 OxRdtase_FAD/NAD-bd 211 312
No external refs found!