Aliases : PYM
Description : component *(PYM) of RNA quality control Exon Junction complex & original description: none
Gene families : OG0005414 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005414_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Ppi_g00475 | |
Cluster | HCCA: Cluster_235 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00008p00071380 | PYM,... | RNA processing.RNA quality control Exon Junction complex... | 0.03 | OrthoFinder output from all 47 species | |
AT1G11400 | PYM | partner of Y14-MAGO | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003674 | molecular_function | IEP | HCCA |
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003677 | DNA binding | IEP | HCCA |
MF | GO:0003885 | D-arabinono-1,4-lactone oxidase activity | IEP | HCCA |
MF | GO:0004175 | endopeptidase activity | IEP | HCCA |
MF | GO:0004252 | serine-type endopeptidase activity | IEP | HCCA |
MF | GO:0004386 | helicase activity | IEP | HCCA |
MF | GO:0008233 | peptidase activity | IEP | HCCA |
MF | GO:0008236 | serine-type peptidase activity | IEP | HCCA |
MF | GO:0008289 | lipid binding | IEP | HCCA |
CC | GO:0016020 | membrane | IEP | HCCA |
MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | HCCA |
MF | GO:0016899 | oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor | IEP | HCCA |
MF | GO:0017171 | serine hydrolase activity | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR015362 | WIBG_mago-bd | 29 | 55 |
No external refs found! |