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  5. Ppi_g00421

Ppi_g00421


Description : protein involved in cytochrome b6/f complex assembly *(DAC) & original description: none


Gene families : OG0007052 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007052_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g00421

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00095p00166740 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.cytochrome b6/f... 0.06 OrthoFinder output from all 47 species
Adi_g011271 No alias protein involved in cytochrome b6/f complex assembly... 0.02 OrthoFinder output from all 47 species
Adi_g068747 No alias protein involved in cytochrome b6/f complex assembly... 0.03 OrthoFinder output from all 47 species
Aev_g04394 No alias protein involved in cytochrome b6/f complex assembly... 0.03 OrthoFinder output from all 47 species
Als_g09082 No alias protein involved in cytochrome b6/f complex assembly... 0.05 OrthoFinder output from all 47 species
Aob_g34923 No alias protein involved in cytochrome b6/f complex assembly... 0.03 OrthoFinder output from all 47 species
Aop_g21364 No alias protein involved in cytochrome b6/f complex assembly... 0.03 OrthoFinder output from all 47 species
Aspi01Gene30737.t2 Aspi01Gene30737 protein involved in cytochrome b6/f complex assembly... 0.04 OrthoFinder output from all 47 species
Cba_g08738 No alias protein involved in cytochrome b6/f complex assembly... 0.02 OrthoFinder output from all 47 species
Cre01.g000850 No alias Photosynthesis.photophosphorylation.cytochrome b6/f... 0.02 OrthoFinder output from all 47 species
Dac_g14010 No alias protein involved in cytochrome b6/f complex assembly... 0.08 OrthoFinder output from all 47 species
Dcu_g16352 No alias protein involved in cytochrome b6/f complex assembly... 0.08 OrthoFinder output from all 47 species
GSVIVT01008459001 No alias Photosynthesis.photophosphorylation.cytochrome b6/f... 0.02 OrthoFinder output from all 47 species
LOC_Os01g59080.1 LOC_Os01g59080 DAC protein involved in cytochrome b6/f complex assembly 0.04 OrthoFinder output from all 47 species
Len_g11472 No alias protein involved in cytochrome b6/f complex assembly... 0.06 OrthoFinder output from all 47 species
Mp2g10730.1 No alias DAC protein involved in cytochrome b6/f complex assembly 0.04 OrthoFinder output from all 47 species
Msp_g12301 No alias protein involved in cytochrome b6/f complex assembly... 0.04 OrthoFinder output from all 47 species
Nbi_g00338 No alias protein involved in cytochrome b6/f complex assembly... 0.02 OrthoFinder output from all 47 species
Ore_g04007 No alias protein involved in cytochrome b6/f complex assembly... 0.03 OrthoFinder output from all 47 species
Pir_g01527 No alias protein involved in cytochrome b6/f complex assembly... 0.03 OrthoFinder output from all 47 species
Solyc05g006440.4.1 Solyc05g006440 DAC protein involved in cytochrome b6/f complex assembly 0.05 OrthoFinder output from all 47 species
Spa_g03184 No alias protein involved in cytochrome b6/f complex assembly... 0.03 OrthoFinder output from all 47 species
Tin_g00254 No alias protein involved in cytochrome b6/f complex assembly... 0.04 OrthoFinder output from all 47 species
Zm00001e019533_P001 Zm00001e019533 DAC protein involved in cytochrome b6/f complex assembly 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005886 plasma membrane IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0010109 regulation of photosynthesis IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
MF GO:0010242 oxygen evolving activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0042548 regulation of photosynthesis, light reaction IEP HCCA
BP GO:0042549 photosystem II stabilization IEP HCCA
MF GO:0042586 peptide deformylase activity IEP HCCA
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR021562 DUF3007 77 172
No external refs found!