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  5. AMTR_s00868p00010810

AMTR_s00868p00010810 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00868.1

No description available


Gene families : OG0001103 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001103_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00868p00010810
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00155p00024540 CHUP1,... Protein CHUP1, chloroplastic OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os01g46340.1 LOC_Os01g46340 regulatory protein (IPGA) of cortical microtubule organisation 0.02 OrthoFinder output from all 47 species
Nbi_g32646 CHUP1 motility factor *(CHUP) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g069560.3.1 CHUP1, Solyc02g069560 Protein CHUP1, chloroplastic OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!