AMTR_s00234p00015090 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00234.2

Description : Calcium-binding protein KIC OS=Arabidopsis thaliana


Gene families : OG0001109 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001109_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00234p00015090

Target Alias Description ECC score Gene Family Method Actions
AT4G27280 No alias Calcium-binding EF-hand family protein 0.04 OrthoFinder output from all 47 species
AT5G54490 PBP1 pinoid-binding protein 1 0.05 OrthoFinder output from all 47 species
Adi_g087432 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g115388 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g05269 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g09810 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g15929 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g07337 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g35274 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g45008 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene16361.t1 PBP1, Aspi01Gene16361 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene49046.t1 PBP1, Aspi01Gene49046 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene49047.t1 PBP1, Aspi01Gene49047 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene63044.t1 PBP1, Aspi01Gene63044 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.24G000300.1 Ceric.24G000300 not classified & original description: pacid=50628799... 0.03 OrthoFinder output from all 47 species
Ceric.30G075500.1 Ceric.30G075500 not classified & original description: pacid=50608938... 0.02 OrthoFinder output from all 47 species
Ceric.30G075700.1 PBP1, Ceric.30G075700 not classified & original description: pacid=50608449... 0.03 OrthoFinder output from all 47 species
Ceric.30G075800.1 PBP1, Ceric.30G075800 not classified & original description: pacid=50608432... 0.03 OrthoFinder output from all 47 species
Dac_g19238 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g33255 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g00624 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g13120 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01014539001 PBP1 Calcium-binding protein KRP1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_10402 No alias Calcium-binding protein KIC OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
LOC_Os01g57470.1 PBP1, LOC_Os01g57470 Calcium-binding protein PBP1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os06g46950.1 LOC_Os06g46950 Calcium-binding protein KIC OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
MA_10168324g0010 No alias Calcium-binding protein KIC OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_10212526g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
MA_1999194g0010 No alias Calcium-binding protein KRP1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
MA_25900g0010 No alias Calcium-binding protein KIC OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_25900g0020 No alias Calcium-binding protein KIC OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_32393g0010 No alias Calcium-binding protein KIC OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
MA_48747g0010 No alias Calcium-binding protein KIC OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_8085699g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Msp_g09603 PBP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g19618 PBP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g25676 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g34482 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g44428 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57595 PBP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g26313 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g28291 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g12034 PBP1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g41840 PBP1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g079720.1.1 PBP1, Solyc02g079720 Calcium-binding protein KRP1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc10g006660.3.1 Solyc10g006660 Calcium-binding protein KRP1 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
Solyc10g006700.1.1 Solyc10g006700 Calcium-binding protein KRP1 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Solyc10g006740.4.1 Solyc10g006740 Calcium-binding protein KRP1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Spa_g15913 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g56723 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g57374 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e013045_P001 Zm00001e013045 Calcium-binding protein KIC OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Zm00001e019618_P001 PBP1, Zm00001e019618 Calcium-binding protein PBP1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e025269_P001 Zm00001e025269 Calcium-binding protein KIC OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004143 diacylglycerol kinase activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006072 glycerol-3-phosphate metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0007186 G protein-coupled receptor signaling pathway IEP HCCA
BP GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0046168 glycerol-3-phosphate catabolic process IEP HCCA
BP GO:0046434 organophosphate catabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0052646 alditol phosphate metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!