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  5. AMTR_s00197p00030350

AMTR_s00197p00030350 (SPL7, ATSPL7,...)


Aliases : SPL7, ATSPL7, evm_27.TU.AmTr_v1.0_scaffold00197.11

Description : Nutrient uptake.copper uptake.regulation.SPL7 copper homeostasis regulator


Gene families : OG0000121 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000121_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00197p00030350

Target Alias Description ECC score Gene Family Method Actions
Aev_g02510 SPL2 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g46381 SPL3 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g05347 SPL7, ATSPL7 regulatory protein *(SPL7) of copper homeostasis &... 0.02 OrthoFinder output from all 47 species
Cba_g26615 SPL2 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cre10.g433350 SPL4 RNA biosynthesis.transcriptional activation.SBP... 0.02 OrthoFinder output from all 47 species
Ehy_g15224 SPL8 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g23300 SPL12 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os02g04680.1 SPL2, LOC_Os02g04680 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
LOC_Os06g45310.1 SPL11, LOC_Os06g45310 transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
MA_10427464g0040 SPL1R2, ATSPL14,... transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Mp8g11850.1 SPL7, ATSPL7 transcription factor (SBP). copper homeostasis regulator (SPL7) 0.02 OrthoFinder output from all 47 species
Sam_g04263 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g38749 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g52379 SPL2 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP HCCA
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP HCCA
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR004333 SBP_dom 129 205
No external refs found!